Information for 11-WTAACAAAGGAMCTGG (Motif 18)

C G T A C A G T T G C A C G T A A T G C C G T A C G T A T C G A T C A G T A C G T G C A G T A C A T G C A C G T A T C G T C A G
Reverse Opposite:
A G T C T A G C T C G A A T C G C A T G A C G T A G T C A G T C A C G T G A C T A C G T A T C G C G A T A C G T G T C A G C A T
p-value:1e-11
log p-value:-2.675e+01
Information Content per bp:1.675
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif38.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets54.0 +/- 22.7bp
Average Position of motif in Background42.6 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---WTAACAAAGGAMCTGG
AGAAGAACAAAGGACTA--
 A C G T A C G T A C G T C G T A C A G T T G C A C G T A A T G C C G T A C G T A T C G A T C A G T A C G T G C A G T A C A T G C A C G T A T C G T C A G
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---WTAACAAAGGAMCTGG
ATAAGAACAAAGGACTA--
 A C G T A C G T A C G T C G T A C A G T T G C A C G T A A T G C C G T A C G T A T C G A T C A G T A C G T G C A G T A C A T G C A C G T A T C G T C A G
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----WTAACAAAGGAMCTGG
AAAAATAACAAACGG-----
 A C G T A C G T A C G T A C G T C G T A C A G T T G C A C G T A A T G C C G T A C G T A T C G A T C A G T A C G T G C A G T A C A T G C A C G T A T C G T C A G
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:WTAACAAAGGAMCTGG
AAAACAAAGG------
 C G T A C A G T T G C A C G T A A T G C C G T A C G T A T C G A T C A G T A C G T G C A G T A C A T G C A C G T A T C G T C A G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:WTAACAAAGGAMCTGG
--AACAAAGG------
 C G T A C A G T T G C A C G T A A T G C C G T A C G T A T C G A T C A G T A C G T G C A G T A C A T G C A C G T A T C G T C A G
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:WTAACAAAGGAMCTGG
--RACAAWGG------
 C G T A C A G T T G C A C G T A A T G C C G T A C G T A T C G A T C A G T A C G T G C A G T A C A T G C A C G T A T C G T C A G
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:WTAACAAAGGAMCTGG
GGAACAAAGR------
 C G T A C A G T T G C A C G T A A T G C C G T A C G T A T C G A T C A G T A C G T G C A G T A C A T G C A C G T A T C G T C A G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:WTAACAAAGGAMCTGG
VRRACAAWGG------
 C G T A C A G T T G C A C G T A A T G C C G T A C G T A T C G A T C A G T A C G T G C A G T A C A T G C A C G T A T C G T C A G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:WTAACAAAGGAMCTGG
-GAACAATGGN-----
 C G T A C A G T T G C A C G T A A T G C C G T A C G T A T C G A T C A G T A C G T G C A G T A C A T G C A C G T A T C G T C A G
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:WTAACAAAGGAMCTGG
RNAACAATGG------
 C G T A C A G T T G C A C G T A A T G C C G T A C G T A T C G A T C A G T A C G T G C A G T A C A T G C A C G T A T C G T C A G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T