Information for 9-TGGAGAGCTC (Motif 15)

C G A T C T A G A C T G C G T A T C A G C G T A C T A G G T A C A C G T G T A C
Reverse Opposite:
A C T G C G T A A C T G A G T C A C G T A G T C A C G T A G T C G A T C C G T A
p-value:1e-12
log p-value:-2.806e+01
Information Content per bp:1.842
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif128.5
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets49.9 +/- 22.7bp
Average Position of motif in Background51.0 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0170.1_Tgif2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGGAGAGCTC---
GTATTGACAGCTNNTT
 A C G T A C G T A C G T C G A T C T A G A C T G C G T A T C A G C G T A C T A G G T A C A C G T G T A C A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

PH0102.1_Meis1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGGAGAGCTC---
NTATTGACAGCTNNTT
 A C G T A C G T A C G T C G A T C T A G A C T G C G T A T C A G C G T A C T A G G T A C A C G T G T A C A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGGAGAGCTC---
NTATTGACAGGTNNTN
 A C G T A C G T A C G T C G A T C T A G A C T G C G T A T C A G C G T A C T A G G T A C A C G T G T A C A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0140.1_Pknox1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGGAGAGCTC---
GGATTGACAGGTCNTT
 A C G T A C G T A C G T C G A T C T A G A C T G C G T A T C A G C G T A C T A G G T A C A C G T G T A C A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGGAGAGCTC
TTGAGTGSTT
 C G A T C T A G A C T G C G T A T C A G C G T A C T A G G T A C A C G T G T A C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGGAGAGCTC
BTBRAGTGSN-
 A C G T C G A T C T A G A C T G C G T A T C A G C G T A C T A G G T A C A C G T G T A C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGAGCTC
CTYRAGTGSY-
 A C G T C G A T C T A G A C T G C G T A T C A G C G T A C T A G G T A C A C G T G T A C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGGAGAGCTC---
GATATTGACAGCTGCGT
 A C G T A C G T A C G T A C G T C G A T C T A G A C T G C G T A T C A G C G T A C T A G G T A C A C G T G T A C A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGGAGAGCTC---
GTATTGACAGGTNNTT
 A C G T A C G T A C G T C G A T C T A G A C T G C G T A T C A G C G T A C T A G G T A C A C G T G T A C A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGAGCTC
CTTGAGTGGCT
 A C G T C G A T C T A G A C T G C G T A T C A G C G T A C T A G G T A C A C G T G T A C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T