Information for 12-GGCTRATTDGWAR (Motif 14)

C A T G A T C G G A T C C G A T C T A G G C T A G C A T A C G T C T G A T A C G G C A T C G T A T C G A
Reverse Opposite:
A G C T C G A T C G T A A G T C G A C T C G T A C G T A C G A T G A T C C G T A C T A G T A G C G T A C
p-value:1e-12
log p-value:-2.846e+01
Information Content per bp:1.554
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif6.57%
Number of Background Sequences with motif952.5
Percentage of Background Sequences with motif1.98%
Average Position of motif in Targets49.9 +/- 27.2bp
Average Position of motif in Background50.1 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0131.1_Pax4/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGCTRATTDGWAR-
NNGNGCTAATTAGNTNA
 A C G T A C G T A C G T C A T G A T C G G A T C C G A T C T A G G C T A G C A T A C G T C T G A T A C G G C A T C G T A T C G A A C G T
C A T G G A C T A T C G T C A G C T A G A G T C C A G T C G T A C T G A A G C T G A C T G T C A C T A G G C A T A G C T A T G C C G T A

HESX1/MA0894.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGCTRATTDGWAR
-GCTAATTGGC--
 C A T G A T C G G A T C C G A T C T A G G C T A G C A T A C G T C T G A T A C G G C A T C G T A T C G A
A C G T T C A G G A T C C G A T C T G A T C G A A C G T A G C T C T A G T C A G G A T C A C G T A C G T

GBX1/MA0889.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCTRATTDGWAR
-GCTAATTAGN--
 C A T G A T C G G A T C C G A T C T A G G C T A G C A T A C G T C T G A T A C G G C A T C G T A T C G A
A C G T T C A G A T G C C G A T C T G A C T G A A C G T A G C T C T G A T A C G A G C T A C G T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGCTRATTDGWAR
-GCTAATTAGC--
 C A T G A T C G G A T C C G A T C T A G G C T A G C A T A C G T C T G A T A C G G C A T C G T A T C G A
A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C A C G T A C G T

PH0127.1_Nobox/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCTRATTDGWAR--
CGCGCTAATTAGGTATC
 A C G T A C G T C A T G A T C G G A T C C G A T C T A G G C T A G C A T A C G T C T G A T A C G G C A T C G T A T C G A A C G T A C G T
T A G C A T C G A T G C T C A G A G T C G A C T C T G A C G T A G C A T A G C T C T G A T C A G A C T G G C A T C G T A G A C T A T G C

LHX6/MA0658.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCTRATTDGWAR
-NCTAATTAGT--
 C A T G A T C G G A T C C G A T C T A G G C T A G C A T A C G T C T G A T A C G G C A T C G T A T C G A
A C G T T C A G A G T C G A C T T C G A T C G A A C G T A G C T T C G A T C A G A G C T A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCTRATTDGWAR--
AAAGCTAATTAGCGAAA
 A C G T A C G T C A T G A T C G G A T C C G A T C T A G G C T A G C A T A C G T C T G A T A C G G C A T C G T A T C G A A C G T A C G T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A

RAX/MA0718.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCTRATTDGWAR
-NTTAATTGNN--
 C A T G A T C G G A T C C G A T C T A G G C T A G C A T A C G T C T G A T A C G G C A T C G T A T C G A
A C G T C T A G G A C T G C A T C G T A C G T A C A G T C G A T C T A G T C A G A G T C A C G T A C G T

ESX1/MA0644.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCTRATTDGWAR
-GNTAATTGGN--
 C A T G A T C G G A T C C G A T C T A G G C T A G C A T A C G T C T G A T A C G G C A T C G T A T C G A
A C G T C A T G A G C T C G A T C T G A C T G A C A G T A G C T C T A G C T A G A G C T A C G T A C G T

EN1/MA0027.2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGCTRATTDGWAR
--CTAATTAG---
 C A T G A T C G G A T C C G A T C T A G G C T A G C A T A C G T C T G A T A C G G C A T C G T A T C G A
A C G T A C G T A G T C G C A T T C G A C G T A A C G T A C G T C T G A T A C G A C G T A C G T A C G T