Information for 7-CCCACGCGTG (Motif 3)

A T G C A G T C G T A C G C T A A G T C T A C G A G T C T C A G C G A T T A C G
Reverse Opposite:
A T G C G C T A A G T C T C A G A T G C C T A G C G A T C A T G C T A G T A C G
p-value:1e-13
log p-value:-3.030e+01
Information Content per bp:1.660
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif9.82%
Number of Background Sequences with motif1882.4
Percentage of Background Sequences with motif3.99%
Average Position of motif in Targets49.7 +/- 22.4bp
Average Position of motif in Background49.7 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes1/MA1099.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CCCACGCGTG
GGCACGCGTC
 A T G C A G T C G T A C G C T A A G T C T A C G A G T C T C A G C G A T T A C G
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CCCACGCGTG
--CACGCA--
 A T G C A G T C G T A C G C T A A G T C T A C G A G T C T C A G C G A T T A C G
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCCACGCGTG
ACGCCCACGCA--
 A C G T A C G T A C G T A T G C A G T C G T A C G C T A A G T C T A C G A G T C T C A G C G A T T A C G
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCCACGCGTG
NCCACGTG--
 A T G C A G T C G T A C G C T A A G T C T A C G A G T C T C A G C G A T T A C G
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CCCACGCGTG
YCCGCCCACGCN--
 A C G T A C G T A C G T A C G T A T G C A G T C G T A C G C T A A G T C T A C G A G T C T C A G C G A T T A C G
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCCACGCGTG
GGCACGTGCC
 A T G C A G T C G T A C G C T A A G T C T A C G A G T C T C A G C G A T T A C G
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCCACGCGTG
CRCCCACGCA--
 A C G T A C G T A T G C A G T C G T A C G C T A A G T C T A C G A G T C T C A G C G A T T A C G
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCCACGCGTG
-GCACGTGT-
 A T G C A G T C G T A C G C T A A G T C T A C G A G T C T C A G C G A T T A C G
A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCCACGCGTG
GCCACGTG--
 A T G C A G T C G T A C G C T A A G T C T A C G A G T C T C A G C G A T T A C G
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCCACGCGTG
GGCACGTGTC
 A T G C A G T C G T A C G C T A A G T C T A C G A G T C T C A G C G A T T A C G
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C