Information for 1-GGGGGCGCTA (Motif 2)

C A T G T C A G C T A G C A T G T A C G G T A C A T C G T A G C G A C T C G T A
Reverse Opposite:
G C A T C T G A A T C G T A G C C A T G A T G C G T A C G A T C A G T C G T A C
p-value:1e-14
log p-value:-3.349e+01
Information Content per bp:1.511
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif4.83%
Number of Background Sequences with motif552.1
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets54.7 +/- 25.5bp
Average Position of motif in Background47.3 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCGCTA--
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T A C G T C A T G T C A G C T A G C A T G T A C G G T A C A T C G T A G C G A C T C G T A A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGGGGCGCTA----
TTGGGGGCGCCCCTAG
 A C G T A C G T C A T G T C A G C T A G C A T G T A C G G T A C A T C G T A G C G A C T C G T A A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGGGGCGCTA-----
CCTTCGGCGCCAAAAGG
 A C G T A C G T C A T G T C A G C T A G C A T G T A C G G T A C A T C G T A G C G A C T C G T A A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.68
Offset:-7
Orientation:reverse strand
Alignment:-------GGGGGCGCTA---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T C A G C T A G C A T G T A C G G T A C A T C G T A G C G A C T C G T A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCGCTA
ANTGCGGGGGCGGN-
 A C G T A C G T A C G T A C G T A C G T C A T G T C A G C T A G C A T G T A C G G T A C A T C G T A G C G A C T C G T A
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGGGGCGCTA-----
AGCTCGGCGCCAAAAGC
 A C G T A C G T C A T G T C A G C T A G C A T G T A C G G T A C A T C G T A G C G A C T C G T A A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGGGCGCTA--
TTTGGCGCCAAA
 C A T G T C A G C T A G C A T G T A C G G T A C A T C G T A G C G A C T C G T A A C G T A C G T
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGGGGCGCTA---
-RGGGCACTAACY
 C A T G T C A G C T A G C A T G T A C G G T A C A T C G T A G C G A C T C G T A A C G T A C G T A C G T
A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.64
Offset:-9
Orientation:forward strand
Alignment:---------GGGGGCGCTA
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T C A G C T A G C A T G T A C G G T A C A T C G T A G C G A C T C G T A
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGGGGCGCTA-
---GGCGCGCT
 C A T G T C A G C T A G C A T G T A C G G T A C A T C G T A G C G A C T C G T A A C G T
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T