Information for 4-GGGACATGCGGACAGG (Motif 12)

A C T G A C T G A C T G C G T A A G T C G C T A C G A T A C T G A G T C A C T G A C T G G T C A A G T C T G C A T C A G A T C G
Reverse Opposite:
T A G C A G T C A C G T A C T G A C G T A G T C A G T C A C T G G T A C C G T A C A G T A C T G A C G T A G T C A G T C A G T C
p-value:1e-9
log p-value:-2.151e+01
Information Content per bp:1.809
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.2 +/- 19.7bp
Average Position of motif in Background57.0 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGGACATGCGGACAGG-
-----NCGCGGACGTTG
 A C T G A C T G A C T G C G T A A G T C G C T A C G A T A C T G A G T C A C T G A C T G G T C A A G T C T G C A T C A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGGACATGCGGACAGG
TGGGGA------------
 A C G T A C G T A C T G A C T G A C T G C G T A A G T C G C T A C G A T A C T G A G T C A C T G A C T G G T C A A G T C T G C A T C A G A T C G
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGGACATGCGGACAGG
AGGNCANNGTGACCT-
 A C T G A C T G A C T G C G T A A G T C G C T A C G A T A C T G A G T C A C T G A C T G G T C A A G T C T G C A T C A G A T C G
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGGACATGCGGACAGG
GGGAATTGTAGT----
 A C T G A C T G A C T G C G T A A G T C G C T A C G A T A C T G A G T C A C T G A C T G G T C A A G T C T G C A T C A G A T C G
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGGACATGCGGACAGG
TGGCACGTGCCA-----
 A C G T A C T G A C T G A C T G C G T A A G T C G C T A C G A T A C T G A G T C A C T G A C T G G T C A A G T C T G C A T C A G A T C G
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGGACATGCGGACAGG
GGTCANYTGAGGWCA--
 A C G T A C T G A C T G A C T G C G T A A G T C G C T A C G A T A C T G A G T C A C T G A C T G G T C A A G T C T G C A T C A G A T C G
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GGGACATGCGGACAGG
NNAGGGACAAGGGCNC---
 A C G T A C G T A C G T A C T G A C T G A C T G C G T A A G T C G C T A C G A T A C T G A G T C A C T G A C T G G T C A A G T C T G C A T C A G A T C G
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGGACATGCGGACAGG
NAGGTCACNNTGACC--
 A C G T A C T G A C T G A C T G C G T A A G T C G C T A C G A T A C T G A G T C A C T G A C T G G T C A A G T C T G C A T C A G A T C G
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T

ELK1/MA0028.2/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GGGACATGCGGACAGG
--NACTTCCGGT----
 A C T G A C T G A C T G C G T A A G T C G C T A C G A T A C T G A G T C A C T G A C T G G T C A A G T C T G C A T C A G A T C G
A C G T A C G T G A T C T C G A A G T C C G A T A C G T T G A C T G A C A C T G A T C G G A C T A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GGGACATGCGGACAGG
AGGGGGATTAGCTGCC---
 A C G T A C G T A C G T A C T G A C T G A C T G C G T A A G T C G C T A C G A T A C T G A G T C A C T G A C T G G T C A A G T C T G C A T C A G A T C G
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C A C G T A C G T A C G T