Information for 4-GCAAGATGGCGGC (Motif 8)

C A T G A G T C C G T A C T G A A C T G T C G A C G A T A C T G C T A G A G T C A C T G A T C G T A G C
Reverse Opposite:
A T C G T A G C T G A C A C T G A G T C A G T C C G T A A C G T A G T C A G C T A C G T T C A G G T A C
p-value:1e-13
log p-value:-3.087e+01
Information Content per bp:1.750
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif94.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets48.4 +/- 29.3bp
Average Position of motif in Background51.9 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.94
Offset:1
Orientation:forward strand
Alignment:GCAAGATGGCGGC
-CAAGATGGCGGC
 C A T G A G T C C G T A C T G A A C T G T C G A C G A T A C T G C T A G A G T C A C T G A T C G T A G C
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.89
Offset:1
Orientation:forward strand
Alignment:GCAAGATGGCGGC
-CAAGATGGCGGC
 C A T G A G T C C G T A C T G A A C T G T C G A C G A T A C T G C T A G A G T C A C T G A T C G T A G C
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GCAAGATGGCGGC-
---TAATGGCGGNC
 C A T G A G T C C G T A C T G A A C T G T C G A C G A T A C T G C T A G A G T C A C T G A T C G T A G C A C G T
A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCAAGATGGCGGC
AACAGATGGC---
 C A T G A G T C C G T A C T G A A C T G T C G A C G A T A C T G C T A G A G T C A C T G A T C G T A G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCAAGATGGCGGC-
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T C A T G A G T C C G T A C T G A A C T G T C G A C G A T A C T G C T A G A G T C A C T G A T C G T A G C A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCAAGATGGCGGC-----
-NAGANTGGCGGGGNGNA
 C A T G A G T C C G T A C T G A A C T G T C G A C G A T A C T G C T A G A G T C A C T G A T C G T A G C A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCAAGATGGCGGC
AACAGATGGT---
 C A T G A G T C C G T A C T G A A C T G T C G A C G A T A C T G C T A G A G T C A C T G A T C G T A G C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCAAGATGGCGGC
VNAVCAGCTGGC---
 A C G T A C G T C A T G A G T C C G T A C T G A A C T G T C G A C G A T A C T G C T A G A G T C A C T G A T C G T A G C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCAAGATGGCGGC----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T C A T G A G T C C G T A C T G A A C T G T C G A C G A T A C T G C T A G A G T C A C T G A T C G T A G C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

E2F2/MA0864.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCAAGATGGCGGC-----
--AAAATGGCGCCATTTT
 C A T G A G T C C G T A C T G A A C T G T C G A C G A T A C T G C T A G A G T C A C T G A T C G T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T