Information for 7-GGGCGGTCCC (Motif 16)

T C A G A C T G C A T G T G A C A T C G T A C G G C A T T G A C A T G C T G A C
Reverse Opposite:
A C T G T A C G A C T G C G T A A T G C T A G C A C T G G A T C T G A C A G T C
p-value:1e-7
log p-value:-1.772e+01
Information Content per bp:1.650
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif6.88%
Number of Background Sequences with motif1510.6
Percentage of Background Sequences with motif3.19%
Average Position of motif in Targets54.6 +/- 25.0bp
Average Position of motif in Background49.3 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGTCCC
CGTGGGTGGTCC-
 A C G T A C G T A C G T T C A G A C T G C A T G T G A C A T C G T A C G G C A T T G A C A T G C T G A C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGGTCCC
GGGGGCGGGGCC
 A C G T A C G T T C A G A C T G C A T G T G A C A T C G T A C G G C A T T G A C A T G C T G A C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GGGCGGTCCC
GGGCGGGACC
 T C A G A C T G C A T G T G A C A T C G T A C G G C A T T G A C A T G C T G A C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGTCCC----
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T T C A G A C T G C A T G T G A C A T C G T A C G G C A T T G A C A T G C T G A C A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0025.1_Glis2_1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGGTCCC--
NTNTGGGGGGTCNNNA
 A C G T A C G T A C G T A C G T T C A G A C T G C A T G T G A C A T C G T A C G G C A T T G A C A T G C T G A C A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGTCCC
RGKGGGCGGAGC-
 A C G T A C G T A C G T T C A G A C T G C A T G T G A C A T C G T A C G G C A T T G A C A T G C T G A C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGTCCC-
AGGGGGCGGGGCTG
 A C G T A C G T A C G T T C A G A C T G C A T G T G A C A T C G T A C G G C A T T G A C A T G C T G A C A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------GGGCGGTCCC
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C T G C A T G T G A C A T C G T A C G G C A T T G A C A T G C T G A C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GGGCGGTCCC
GGGNGGGGGCGGGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C T G C A T G T G A C A T C G T A C G G C A T T G A C A T G C T G A C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GGGCGGTCCC
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C T G C A T G T G A C A T C G T A C G G C A T T G A C A T G C T G A C
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T