Information for 10-GCTATGCTTG (Motif 20)

A C T G A T G C A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A G T C C G T A A C G T C G T A T A C G A G T C
p-value:1e-8
log p-value:-1.932e+01
Information Content per bp:1.920
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.8 +/- 28.1bp
Average Position of motif in Background70.0 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GCTATGCTTG-
---TTGATTGN
 A C T G A T G C A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C T G A C G T
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GCTATGCTTG
---AAGCTTG
 A C T G A T G C A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C T G
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCTATGCTTG
AAGATATCCTT-
 A C G T A C G T A C T G A T G C A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C T G
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTATGCTTG
TGCTGTGATTT
 A C G T A C T G A T G C A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C T G
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTATGCTTG
GCAGTGATTT
 A C T G A T G C A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C T G
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTATGCTTG----
--TTTGATTGATGN
 A C T G A T G C A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTATGCTTG--
GCTATTTTTGGM
 A C T G A T G C A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C T G A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTATGCTTG--
GCTATTTTTAGC
 A C T G A T G C A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C T G A C G T A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTATGCTTG-----
NGTCACGCTTGGCTGC
 A C G T A C T G A T G C A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCTATGCTTG--
KCTATTTTTRGH
 A C T G A T G C A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C T G A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C