Information for 8-GACACAGAGCAGA (Motif 7)

A C T G G C T A A G T C C G T A A G T C C G T A A C T G C G T A A T C G A G T C C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T A C T G A T G C A C G T A G T C A C G T A C T G A C G T A C T G C G A T A G T C
p-value:1e-12
log p-value:-2.800e+01
Information Content per bp:1.944
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.5 +/- 13.5bp
Average Position of motif in Background20.7 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GACACAGAGCAGA-
TGACANARRCCAGRC
 A C G T A C T G G C T A A G T C C G T A A G T C C G T A A C T G C G T A A T C G A G T C C G T A A C T G C T G A A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GACACAGAGCAGA-
AGAGRRACAGCWGAC
 A C G T A C T G G C T A A G T C C G T A A G T C C G T A A C T G C G T A A T C G A G T C C G T A A C T G C T G A A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GACACAGAGCAGA
--CACAGN-----
 A C T G G C T A A G T C C G T A A G T C C G T A A C T G C G T A A T C G A G T C C G T A A C T G C T G A
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GACACAGAGCAGA
GAGSCCGAGC---
 A C T G G C T A A G T C C G T A A G T C C G T A A C T G C G T A A T C G A G T C C G T A A C T G C T G A
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GACACAGAGCAGA---
----CACAGCAGGGGG
 A C T G G C T A A G T C C G T A A G T C C G T A A C T G C G T A A T C G A G T C C G T A A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GACACAGAGCAGA---
-CCACACAGCAGGAGA
 A C T G G C T A A G T C C G T A A G T C C G T A A C T G C G T A A T C G A G T C C G T A A C T G C T G A A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GACACAGAGCAGA
--CAAAGGTCAG-
 A C T G G C T A A G T C C G T A A G T C C G T A A C T G C G T A A T C G A G T C C G T A A C T G C T G A
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GACACAGAGCAGA
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C T G G C T A A G T C C G T A A G T C C G T A A C T G C G T A A T C G A G T C C G T A A C T G C T G A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GACACAGAGCAGA
GTAGGGCAAAGGTCA--
 A C G T A C G T A C G T A C G T A C T G G C T A A G T C C G T A A G T C C G T A A C T G C G T A A T C G A G T C C G T A A C T G C T G A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GACACAGAGCAGA
TAGGGCAAAGGTCA--
 A C G T A C G T A C G T A C T G G C T A A G T C C G T A A G T C C G T A A C T G C G T A A T C G A G T C C G T A A C T G C T G A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T