Information for 5-WGGAGRCTMAGTAAAK (Motif 10)

C G A T A C T G T A C G C G T A C T A G C T G A A T G C A C G T G T C A C T G A C T A G C A G T C G T A C G T A C G T A A C T G
Reverse Opposite:
T G A C A C G T A C G T C G A T G T C A A G T C G A C T C A G T C G T A A T C G G A C T A G T C A C G T A T G C G T A C G C T A
p-value:1e-12
log p-value:-2.800e+01
Information Content per bp:1.729
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.7 +/- 23.7bp
Average Position of motif in Background77.5 +/- 0.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2/MA0047.2/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:WGGAGRCTMAGTAAAK-
-----NCTAAGTAAACA
 C G A T A C T G T A C G C G T A C T A G C T G A A T G C A C G T G T C A C T G A C T A G C A G T C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:WGGAGRCTMAGTAAAK----
-----NCWRWGTAAACANSV
 C G A T A C T G T A C G C G T A C T A G C T G A A T G C A C G T G T C A C T G A C T A G C A G T C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.58
Offset:7
Orientation:forward strand
Alignment:WGGAGRCTMAGTAAAK-
-------AAAGTAAACA
 C G A T A C T G T A C G C G T A C T A G C T G A A T G C A C G T G T C A C T G A C T A G C A G T C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:WGGAGRCTMAGTAAAK-----
------CAAAGTAAACANNNN
 C G A T A C T G T A C G C G T A C T A G C T G A A T G C A C G T G T C A C T G A C T A G C A G T C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.58
Offset:7
Orientation:forward strand
Alignment:WGGAGRCTMAGTAAAK--
-------TATGTAAATAT
 C G A T A C T G T A C G C G T A C T A G C T G A A T G C A C G T G T C A C T G A C T A G C A G T C G T A C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:WGGAGRCTMAGTAAAK-
-------WAAGTAAAYA
 C G A T A C T G T A C G C G T A C T A G C T G A A T G C A C G T G T C A C T G A C T A G C A G T C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.57
Offset:7
Orientation:forward strand
Alignment:WGGAGRCTMAGTAAAK-
-------AAAGTAAACA
 C G A T A C T G T A C G C G T A C T A G C T G A A T G C A C G T G T C A C T G A C T A G C A G T C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXB1/MA0845.1/Jaspar

Match Rank:8
Score:0.57
Offset:7
Orientation:forward strand
Alignment:WGGAGRCTMAGTAAAK--
-------TATGTAAATAT
 C G A T A C T G T A C G C G T A C T A G C T G A A T G C A C G T G T C A C T G A C T A G C A G T C G T A C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:WGGAGRCTMAGTAAAK---
-------TATGTAAACANG
 C G A T A C T G T A C G C G T A C T A G C T G A A T G C A C G T G T C A C T G A C T A G C A G T C G T A C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.55
Offset:7
Orientation:forward strand
Alignment:WGGAGRCTMAGTAAAK---
-------TAAGTAAACAAA
 C G A T A C T G T A C G C G T A C T A G C T G A A T G C A C G T G T C A C T G A C T A G C A G T C G T A C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A