Information for 21-GAGWGGGTTARYT (Motif 23)

C T A G C G T A A C T G C G A T A C T G C T A G A C T G A C G T C G A T G T C A C T A G A G C T A G C T
Reverse Opposite:
C T G A C T G A A G T C A C G T G C T A C G T A A G T C A G T C G T A C C G T A G T A C A C G T A G T C
p-value:1e-7
log p-value:-1.676e+01
Information Content per bp:1.778
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.3 +/- 25.4bp
Average Position of motif in Background48.9 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAGWGGGTTARYT
AAGAGGATTAG--
 C T A G C G T A A C T G C G A T A C T G C T A G A C T G A C G T C G A T G T C A C T A G A G C T A G C T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAGWGGGTTARYT
TGCGGAGTGGGACTGG-
 A C G T A C G T A C G T A C G T C T A G C G T A A C T G C G A T A C T G C T A G A C T G A C G T C G A T G T C A C T A G A G C T A G C T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GAGWGGGTTARYT
NWTGATTRGRTTAWN-
 A C G T A C G T A C G T C T A G C G T A A C T G C G A T A C T G C T A G A C T G A C G T C G A T G T C A C T A G A G C T A G C T
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C A C G T

PH0129.1_Otx1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGWGGGTTARYT---
AGAGGGGATTAATTTAT
 A C G T C T A G C G T A A C T G C G A T A C T G C T A G A C T G A C G T C G A T G T C A C T A G A G C T A G C T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0138.1_Pitx2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGWGGGTTARYT---
TGAAGGGATTAATCATC
 A C G T C T A G C G T A A C T G C G A T A C T G C T A G A C T G A C G T C G A T G T C A C T A G A G C T A G C T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GAGWGGGTTARYT
AATTTCAAGTGGCTTN---
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C T G C G A T A C T G C T A G A C T G A C G T C G A T G T C A C T A G A G C T A G C T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAGWGGGTTARYT
TGATTAAATTA---
 A C G T C T A G C G T A A C T G C G A T A C T G C T A G A C T G A C G T C G A T G T C A C T A G A G C T A G C T
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GAGWGGGTTARYT
----GGATTAGC-
 C T A G C G T A A C T G C G A T A C T G C T A G A C T G A C G T C G A T G T C A C T A G A G C T A G C T
A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAGWGGGTTARYT
TTGAGTGSTT-----
 A C G T A C G T C T A G C G T A A C T G C G A T A C T G C T A G A C T G A C G T C G A T G T C A C T A G A G C T A G C T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GAGWGGGTTARYT
AANTTCAAGTGGCTTN---
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C T G C G A T A C T G C T A G A C T G A C G T C G A T G T C A C T A G A G C T A G C T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T A C G T A C G T