Information for 19-GCYATRGAGMCGS (Motif 21)

A C T G A G T C A G T C C G T A A G C T C T G A A C T G G T C A A C T G G T C A A G T C A C T G A T C G
Reverse Opposite:
A T G C G T A C A C T G A C G T A G T C A C G T A G T C A G C T C T G A A C G T C T A G A C T G A G T C
p-value:1e-8
log p-value:-1.895e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.2 +/- 23.1bp
Average Position of motif in Background41.1 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCYATRGAGMCGS---
CTACTTGGATACGGAAT
 A C G T A C T G A G T C A G T C C G T A A G C T C T G A A C T G G T C A A C T G G T C A A G T C A C T G A T C G A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCYATRGAGMCGS
TTGCCATGGCAACN-
 A C G T A C G T A C T G A G T C A G T C C G T A A G C T C T G A A C T G G T C A A C T G G T C A A G T C A C T G A T C G
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCYATRGAGMCGS
GTTGCCATGGNAAC--
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G C T C T G A A C T G G T C A A C T G G T C A A G T C A C T G A T C G
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C A C G T A C G T

RFX3/MA0798.1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCYATRGAGMCGS
CGTTGCCATGGCAACG-
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G C T C T G A A C T G G T C A A C T G G T C A A G T C A C T G A T C G
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCYATRGAGMCGS
GRTGMTRGAGCC--
 A C G T A C T G A G T C A G T C C G T A A G C T C T G A A C T G G T C A A C T G G T C A A G T C A C T G A T C G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T

RFX4/MA0799.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCYATRGAGMCGS
CGTTGCCATGGCAACG-
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G C T C T G A A C T G G T C A A C T G G T C A A G T C A C T G A T C G
A T G C C T A G G C A T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G A C G T

RFX2/MA0600.2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCYATRGAGMCGS
CGTTGCCATGGCAACG-
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G C T C T G A A C T G G T C A A C T G G T C A A G T C A C T G A T C G
A T G C T C A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G A C G T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCYATRGAGMCGS
KGTTGCCATGGCAAC--
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G C T C T G A A C T G G T C A A C T G G T C A A G T C A C T G A T C G
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCYATRGAGMCGS
GTTGCCATGGCAACCG
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G C T C T G A A C T G G T C A A C T G G T C A A G T C A C T G A T C G
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G

RFX5/MA0510.2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GCYATRGAGMCGS
NGTTGCCATGGCAACG-
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G C T C T G A A C T G G T C A A C T G G T C A A G T C A C T G A T C G
A T G C C T A G A C G T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T C G A G A T C T A C G A C G T