Information for 11-CGCTCCGGCGGAG (Motif 13)

A G T C A C T G G T A C A C G T A T G C A G T C A C T G A C T G A G T C A C T G A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C A G T C A C T G A G T C A G T C C T A G A T C G G T C A A C T G A G T C A C T G
p-value:1e-10
log p-value:-2.397e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.3 +/- 25.1bp
Average Position of motif in Background87.4 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGCTCCGGCGGAG
-GCTCCG------
 A G T C A C T G G T A C A C G T A T G C A G T C A C T G A C T G A G T C A C T G A C T G C G T A C T A G
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGCTCCGGCGGAG----
NAGANTGGCGGGGNGNA
 A G T C A C T G G T A C A C G T A T G C A G T C A C T G A C T G A G T C A C T G A C T G C G T A C T A G A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGCTCCGGCGGAG
-GCGCATGCGCAG
 A G T C A C T G G T A C A C G T A T G C A G T C A C T G A C T G A G T C A C T G A C T G C G T A C T A G
A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGCTCCGGCGGAG-
--RGKGGGCGGAGC
 A G T C A C T G G T A C A C G T A T G C A G T C A C T G A C T G A G T C A C T G A C T G C G T A C T A G A C G T
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

EGR1/MA0162.2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCTCCGGCGGAG-
GGCGGGGGCGGGGG
 A G T C A C T G G T A C A C G T A T G C A G T C A C T G A C T G A G T C A C T G A C T G C G T A C T A G A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

NRF1/MA0506.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGCTCCGGCGGAG
TGCGCAGGCGC--
 A G T C A C T G G T A C A C G T A T G C A G T C A C T G A C T G A G T C A C T G A C T G C G T A C T A G
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGCTCCGGCGGAG
ANTGCGGGGGCGGN-
 A C G T A C G T A G T C A C T G G T A C A C G T A T G C A G T C A C T G A C T G A G T C A C T G A C T G C G T A C T A G
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGCTCCGGCGGAG-
GGCCYCCTGCTGDGH
 A C G T A G T C A C T G G T A C A C G T A T G C A G T C A C T G A C T G A G T C A C T G A C T G C G T A C T A G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CGCTCCGGCGGAG-
----CCTGCTGAGH
 A G T C A C T G G T A C A C G T A T G C A G T C A C T G A C T G A G T C A C T G A C T G C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

EGR3/MA0732.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CGCTCCGGCGGAG
ANTGCGTGGGCGTNN
 A C G T A C G T A G T C A C T G G T A C A C G T A T G C A G T C A C T G A C T G A G T C A C T G A C T G C G T A C T A G
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G