Information for 5-GTGTCTBTAGCCC (Motif 6)

A C T G C G A T A C T G A C G T A G T C A C G T A G T C G A C T C T G A A T C G A G T C A G T C A T G C
Reverse Opposite:
A T C G A C T G A C T G A T G C A G C T C G T A T A C G C G T A A C T G G T C A A G T C C G T A A G T C
p-value:1e-12
log p-value:-2.818e+01
Information Content per bp:1.845
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.8 +/- 30.6bp
Average Position of motif in Background44.0 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTGTCTBTAGCCC
AGGTCTCTAACC-
 A C T G C G A T A C T G A C G T A G T C A C G T A G T C G A C T C T G A A T C G A G T C A G T C A T G C
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTGTCTBTAGCCC
CTGTCTGTCACCT
 A C T G C G A T A C T G A C G T A G T C A C G T A G T C G A C T C T G A A T C G A G T C A G T C A T G C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTGTCTBTAGCCC
TWGTCTGV-----
 A C T G C G A T A C T G A C G T A G T C A C G T A G T C G A C T C T G A A T C G A G T C A G T C A T G C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTGTCTBTAGCCC-
---GCTGTTACCCT
 A C T G C G A T A C T G A C G T A G T C A C G T A G T C G A C T C T G A A T C G A G T C A G T C A T G C A C G T
A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTGTCTBTAGCCC
-TGTCTGDCACCT
 A C T G C G A T A C T G A C G T A G T C A C G T A G T C G A C T C T G A A T C G A G T C A G T C A T G C
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GTGTCTBTAGCCC-
--GGCTCYAKCAYC
 A C T G C G A T A C T G A C G T A G T C A C G T A G T C G A C T C T G A A T C G A G T C A G T C A T G C A C G T
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GTGTCTBTAGCCC
GGNGCGNCTGTTNNN-
 A C G T A C G T A C G T A C T G C G A T A C T G A C G T A G T C A C G T A G T C G A C T C T G A A T C G A G T C A G T C A T G C
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTGTCTBTAGCCC-----
-NNNNGGTACCCCCCANN
 A C T G C G A T A C T G A C G T A G T C A C G T A G T C G A C T C T G A A T C G A G T C A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GTGTCTBTAGCCC
VBSYGTCTGG-----
 A C G T A C G T A C T G C G A T A C T G A C G T A G T C A C G T A G T C G A C T C T G A A T C G A G T C A G T C A T G C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GTGTCTBTAGCCC
CTGTCTGG-----
 A C T G C G A T A C T G A C G T A G T C A C G T A G T C G A C T C T G A A T C G A G T C A G T C A T G C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T