Information for 8-CAGTCGCCGT (Motif 11)

A G T C C G T A A T C G C G A T A G T C A T C G G T A C A G T C C A T G A G C T
Reverse Opposite:
C T G A G T A C A C T G A C T G A T G C A C T G G C T A A T G C C G A T A C T G
p-value:1e-8
log p-value:-2.004e+01
Information Content per bp:1.847
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif136.6
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets49.1 +/- 25.7bp
Average Position of motif in Background50.1 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCGCCGT
CCAGACRSVB-
 A C G T A G T C C G T A A T C G C G A T A G T C A T C G G T A C A G T C C A T G A G C T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

PROX1/MA0794.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGTCGCCGT-
CAAGACGCCTTA
 A C G T A G T C C G T A A T C G C G A T A G T C A T C G G T A C A G T C C A T G A G C T A C G T
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGTCGCCGT--
-GTCCGCCATTA
 A G T C C G T A A T C G C G A T A G T C A T C G G T A C A G T C C A T G A G C T A C G T A C G T
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

POL002.1_INR/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGTCGCCGT
TCAGTCTT---
 A C G T A G T C C G T A A T C G C G A T A G T C A T C G G T A C A G T C C A T G A G C T
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CAGTCGCCGT-
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G C G A T A G T C A T C G G T A C A G T C C A T G A G C T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CAGTCGCCGT---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G C G A T A G T C A T C G G T A C A G T C C A T G A G C T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCGCCGT
CCAGACAG---
 A C G T A G T C C G T A A T C G C G A T A G T C A T C G G T A C A G T C C A T G A G C T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAGTCGCCGT-
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G C G A T A G T C A T C G G T A C A G T C C A T G A G C T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CAGTCGCCGT---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G C G A T A G T C A T C G G T A C A G T C C A T G A G C T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAGTCGCCGT----
--GCCGCCATCTTG
 A G T C C G T A A T C G C G A T A G T C A T C G G T A C A G T C C A T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G