Information for 1-VRTGACGTMA (Motif 2)

T C A G T C G A A C G T A C T G C T G A A G T C A C T G A G C T G T C A G T C A
Reverse Opposite:
C A G T C A G T C T G A A G T C T C A G A G C T T G A C T G C A A G C T A G T C
p-value:1e-51
log p-value:-1.175e+02
Information Content per bp:1.656
Number of Target Sequences with motif106.0
Percentage of Target Sequences with motif11.48%
Number of Background Sequences with motif807.2
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets50.5 +/- 22.7bp
Average Position of motif in Background48.5 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crem/MA0609.1/Jaspar

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:VRTGACGTMA
TATGACGTAA
 T C A G T C G A A C G T A C T G C T G A A G T C A C T G A G C T G T C A G T C A
A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:forward strand
Alignment:VRTGACGTMA
GATGACGTCA
 T C A G T C G A A C G T A C T G C T G A A G T C A C T G A G C T G T C A G T C A
T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A

Atf1/MA0604.1/Jaspar

Match Rank:3
Score:0.93
Offset:1
Orientation:forward strand
Alignment:VRTGACGTMA
-ATGACGTA-
 T C A G T C G A A C G T A C T G C T G A A G T C A C T G A G C T G T C A G T C A
A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T

CREB1/MA0018.2/Jaspar

Match Rank:4
Score:0.90
Offset:2
Orientation:forward strand
Alignment:VRTGACGTMA
--TGACGTCA
 T C A G T C G A A C G T A C T G C T G A A G T C A C T G A G C T G T C A G T C A
A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

Creb5/MA0840.1/Jaspar

Match Rank:5
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:VRTGACGTMA--
NGTGACGTCATN
 T C A G T C G A A C G T A C T G C T G A A G T C A C T G A G C T G T C A G T C A A C G T A C G T
C T A G T C A G C G A T C A T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T A G C T

PB0004.1_Atf1_1/Jaspar

Match Rank:6
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--VRTGACGTMA----
ACGATGACGTCATCGA
 A C G T A C G T T C A G T C G A A C G T A C T G C T G A A G T C A C T G A G C T G T C A G T C A A C G T A C G T A C G T A C G T
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A

PB0038.1_Jundm2_1/Jaspar

Match Rank:7
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--VRTGACGTMA----
NCGATGACGTCATCGN
 A C G T A C G T T C A G T C G A A C G T A C T G C T G A A G T C A C T G A G C T G T C A G T C A A C G T A C G T A C G T A C G T
C T G A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T T G A C T A C G T A C G

ATF7/MA0834.1/Jaspar

Match Rank:8
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-VRTGACGTMA---
CGATGACGTCATCG
 A C G T T C A G T C G A A C G T A C T G C T G A A G T C A C T G A G C T G T C A G T C A A C G T A C G T A C G T
A G T C C T A G T C G A C A G T C A T G C T G A A G T C T C A G C A G T T G A C C T G A A G C T G T A C T C A G

GMEB2/MA0862.1/Jaspar

Match Rank:9
Score:0.89
Offset:2
Orientation:forward strand
Alignment:VRTGACGTMA
--TTACGTAA
 T C A G T C G A A C G T A C T G C T G A A G T C A C T G A G C T G T C A G T C A
A C G T A C G T A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:10
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:VRTGACGTMA--
GATGACGTCATC
 T C A G T C G A A C G T A C T G C T G A A G T C A C T G A G C T G T C A G T C A A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C A G A C G T G T A C C T G A A G C T A T G C