Information for 7-TGGTCTCCAGYGG (Motif 5)

A C G T A C T G A C T G A C G T A T G C A C G T A G T C A G T C G T C A A C T G A G C T C A T G T C A G
Reverse Opposite:
A G T C G T A C T C G A A G T C A C G T A C T G A C T G G T C A A T C G C G T A G T A C G T A C C G T A
p-value:1e-13
log p-value:-3.016e+01
Information Content per bp:1.792
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.1 +/- 19.9bp
Average Position of motif in Background49.5 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:1
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TGGTCTCCAGYGG-
NVCAKCTGGNNNCCAGMTGB
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A T G C A C G T A G T C A G T C G T C A A C T G A G C T C A T G T C A G A C G T
T A C G T G A C T G A C C G T A A C T G T A G C C G A T A C T G A T C G A G C T A T G C T C G A T A G C G T A C C G T A A C T G T G A C G C A T A C T G A C T G

PB0158.1_Rfx3_2/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGGTCTCCAGYGG-----
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A T G C A C G T A G T C A G T C G T C A A C T G A G C T C A T G T C A G A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGGTCTCCAGYGG
---TGCCCAGNHW
 A C G T A C T G A C T G A C G T A T G C A C G T A G T C A G T C G T C A A C T G A G C T C A T G T C A G
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGGTCTCCAGYGG-
--GTCCCCAGGGGA
 A C G T A C T G A C T G A C G T A T G C A C G T A G T C A G T C G T C A A C T G A G C T C A T G T C A G A C G T
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGGTCTCCAGYGG-
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A T G C A C G T A G T C A G T C G T C A A C T G A G C T C A T G T C A G A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------TGGTCTCCAGYGG
NNANTGGTGGTCTTNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A T G C A C G T A G T C A G T C G T C A A C T G A G C T C A T G T C A G
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGGTCTCCAGYGG
GTGGGCCCCA----
 A C G T A C G T A C T G A C T G A C G T A T G C A C G T A G T C A G T C G T C A A C T G A G C T C A T G T C A G
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGGTCTCCAGYGG----
NANTTTCAAGTGGTTAN
 A C G T A C T G A C T G A C G T A T G C A C G T A G T C A G T C G T C A A C T G A G C T C A T G T C A G A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGGTCTCCAGYGG---
-GGCCYCCTGCTGDGH
 A C G T A C T G A C T G A C G T A T G C A C G T A G T C A G T C G T C A A C T G A G C T C A T G T C A G A C G T A C G T A C G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGGTCTCCAGYGG
CAGTGTGGTCGC------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A T G C A C G T A G T C A G T C G T C A A C T G A G C T C A T G T C A G
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T