Information for 8-CAGTAATTAC (Motif 16)

T A G C C G T A A C T G A C G T C G T A C G T A C G A T A C G T C G T A G A T C
Reverse Opposite:
C T A G C G A T C G T A C G T A A C G T C G A T G T C A A G T C C G A T A T C G
p-value:1e-8
log p-value:-1.885e+01
Information Content per bp:1.853
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif52.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets49.8 +/- 30.8bp
Average Position of motif in Background49.2 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0062.1_Hoxb7/Jaspar

Match Rank:1
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---CAGTAATTAC---
TNNCATTAATTANTNC
 A C G T A C G T A C G T T A G C C G T A A C T G A C G T C G T A C G T A C G A T A C G T C G T A G A T C A C G T A C G T A C G T
A G C T C G A T T A C G G T A C T G C A A C G T G A C T G T C A G C T A C G A T C A G T C T G A T G A C A C G T T C G A T A G C

PH0072.1_Hoxc8/Jaspar

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CAGTAATTAC-----
ACNNTAATTACNNCAN
 A C G T T A G C C G T A A C T G A C G T C G T A C G T A C G A T A C G T C G T A G A T C A C G T A C G T A C G T A C G T A C G T
T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

PH0055.1_Hoxa7_2/Jaspar

Match Rank:3
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---CAGTAATTAC---
TNCCATTAATTACTNC
 A C G T A C G T A C G T T A G C C G T A A C T G A C G T C G T A C G T A C G A T A C G T C G T A G A T C A C G T A C G T A C G T
A C G T C A G T A T G C A G T C T G C A A C G T G C A T G T C A C G T A A C G T C A G T C G T A T G A C A C G T T G C A T G A C

PH0061.1_Hoxb6/Jaspar

Match Rank:4
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CAGTAATTAC-----
NNNGTAATTACNNATA
 A C G T T A G C C G T A A C T G A C G T C G T A C G T A C G A T A C G T C G T A G A T C A C G T A C G T A C G T A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

MEOX1/MA0661.1/Jaspar

Match Rank:5
Score:0.80
Offset:1
Orientation:forward strand
Alignment:CAGTAATTAC-
-GCTAATTAAC
 T A G C C G T A A C T G A C G T C G T A C G T A C G A T A C G T C G T A G A T C A C G T
A C G T T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C

PH0039.1_Mnx1/Jaspar

Match Rank:6
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---CAGTAATTAC---
NNNCACTAATTANTNN
 A C G T A C G T A C G T T A G C C G T A A C T G A C G T C G T A C G T A C G A T A C G T C G T A G A T C A C G T A C G T A C G T
A T G C C T A G A T G C G A T C T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A T A C G A C G T T G C A T G A C

MEOX2/MA0706.1/Jaspar

Match Rank:7
Score:0.80
Offset:1
Orientation:forward strand
Alignment:CAGTAATTAC-
-AGTAATTAAC
 T A G C C G T A A C T G A C G T C G T A C G T A C G A T A C G T C G T A G A T C A C G T
A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

PH0053.1_Hoxa6/Jaspar

Match Rank:8
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CAGTAATTAC-----
AAGGTAATTACCTAAT
 A C G T T A G C C G T A A C T G A C G T C G T A C G T A C G A T A C G T C G T A G A T C A C G T A C G T A C G T A C G T A C G T
T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

PH0022.1_Dlx3/Jaspar

Match Rank:9
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---CAGTAATTAC----
TCGCGATAATTACCGAC
 A C G T A C G T A C G T T A G C C G T A A C T G A C G T C G T A C G T A C G A T A C G T C G T A G A T C A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

PH0071.1_Hoxc6/Jaspar

Match Rank:10
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CAGTAATTAC-----
CAAATTAATTAATAAAA
 A C G T A C G T T A G C C G T A A C T G A C G T C G T A C G T A C G A T A C G T C G T A G A T C A C G T A C G T A C G T A C G T A C G T
A G T C C T G A G C T A T C G A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A C G T C G T A T C G A T G C A C G T A