Information for 3-GTTTGAAATTAAGCAG (Motif 7)

C T A G A G C T A C G T C G A T A T C G C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A C G T C G A T C G T A C T G A A C G T G C A T A C G T A T G C C G T A C G T A C T G A A G T C
p-value:1e-18
log p-value:-4.313e+01
Information Content per bp:1.829
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.4 +/- 18.3bp
Average Position of motif in Background49.8 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GTTTGAAATTAAGCAG--
---TGACANARRCCAGRC
 C T A G A G C T A C G T C G A T A T C G C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C T G A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTTTGAAATTAAGCAG
CGGTTTCAAA--------
 A C G T A C G T C T A G A G C T A C G T C G A T A T C G C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C T G A G T C C G T A A C T G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTTTGAAATTAAGCAG-
--NWTAAYCYAATCAWN
 C T A G A G C T A C G T C G A T A T C G C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C T G A G T C C G T A A C T G A C G T
A C G T A C G T C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GTTTGAAATTAAGCAG
ATTTGAATT-------
 C T A G A G C T A C G T C G A T A T C G C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C T G A G T C C G T A A C T G
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GTTTGAAATTAAGCAG
----TAATTTAATCA-
 C T A G A G C T A C G T C G A T A T C G C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGAAATTAAGCAG
CCTTTGATGT-------
 A C G T C T A G A G C T A C G T C G A T A T C G C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C T G A G T C C G T A A C T G
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GTTTGAAATTAAGCAG
---CTAATTTAATCAA
 C T A G A G C T A C G T C G A T A T C G C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C T G A G T C C G T A A C T G
A C G T A C G T A C G T G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----GTTTGAAATTAAGCAG
NNTTCCTTTGATCTANA----
 A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T C G A T A T C G C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C T G A G T C C G T A A C T G
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GTTTGAAATTAAGCAG-----
----GANGTTAACTAGTTTNN
 C T A G A G C T A C G T C G A T A T C G C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----GTTTGAAATTAAGCAG
NNTTCCTTTGATCTNNA----
 A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T C G A T A T C G C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C T G A G T C C G T A A C T G
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A A C G T A C G T A C G T A C G T