Information for 16-GCATGACAGG (Motif 20)

A T C G G T A C G C T A A C G T A C T G T G C A G T A C C G T A A C T G A C T G
Reverse Opposite:
A G T C G T A C A C G T A C T G A C G T A G T C G T C A C G A T A C T G A T G C
p-value:1e-9
log p-value:-2.088e+01
Information Content per bp:1.847
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif159.1
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets49.1 +/- 26.7bp
Average Position of motif in Background52.1 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GCATGACAGG
--TTGACAGG
 A T C G G T A C G C T A A C G T A C T G T G C A G T A C C G T A A C T G A C T G
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GCATGACAGG
--TTGACAGC
 A T C G G T A C G C T A A C G T A C T G T G C A G T A C C G T A A C T G A C T G
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GCATGACAGG
--TTGACAG-
 A T C G G T A C G C T A A C G T A C T G T G C A G T A C C G T A A C T G A C T G
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCATGACAGG-----
GGATTGACAGGTCNTT
 A C G T A T C G G T A C G C T A A C G T A C T G T G C A G T A C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCATGACAGG-----
GTATTGACAGGTNNTT
 A C G T A T C G G T A C G C T A A C G T A C T G T G C A G T A C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCATGACAGG-----
NNATTGACAGGTGCTT
 A C G T A T C G G T A C G C T A A C G T A C T G T G C A G T A C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GCATGACAGG-
TGAGTGACAGSC
 A C G T A T C G G T A C G C T A A C G T A C T G T G C A G T A C C G T A A C T G A C T G A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCATGACAGG-----
NTATTGACAGGTNNTN
 A C G T A T C G G T A C G C T A A C G T A C T G T G C A G T A C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCATGACAGG
NTGATTGACAGN
 A C G T A C G T A T C G G T A C G C T A A C G T A C T G T G C A G T A C C G T A A C T G A C T G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCATGACAGG-
-VBTGWCAGCB
 A T C G G T A C G C T A A C G T A C T G T G C A G T A C C G T A A C T G A C T G A C G T
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C