Information for 6-CCCMSCWSWGCCSCCA (Motif 14)

A G T C G T A C G A T C G T A C A T G C A G T C C G A T A T G C C G A T A C T G A G T C A G T C A T G C G T A C A G T C G T C A
Reverse Opposite:
A C G T A C T G A C T G A T C G A C T G A C T G G T A C C G T A A T C G C G T A A C T G A T C G A C T G C A T G C A T G C T A G
p-value:1e-7
log p-value:-1.753e+01
Information Content per bp:1.837
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif24.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets41.4 +/- 23.0bp
Average Position of motif in Background51.3 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCCMSCWSWGCCSCCA
CCCCCTTGGGCCCC--
 A G T C G T A C G A T C G T A C A T G C A G T C C G A T A T G C C G A T A C T G A G T C A G T C A T G C G T A C A G T C G T C A
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCCMSCWSWGCCSCCA
TCCCAGMCRAGCCCC--
 A C G T A G T C G T A C G A T C G T A C A T G C A G T C C G A T A T G C C G A T A C T G A G T C A G T C A T G C G T A C A G T C G T C A
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCCMSCWSWGCCSCCA
--NAGCCCCGCCCCCN
 A G T C G T A C G A T C G T A C A T G C A G T C C G A T A T G C C G A T A C T G A G T C A G T C A T G C G T A C A G T C G T C A
A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCCMSCWSWGCCSCCA
----GCTCCGCCCMCY
 A G T C G T A C G A T C G T A C A T G C A G T C C G A T A T G C C G A T A C T G A G T C A G T C A T G C G T A C A G T C G T C A
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:CCCMSCWSWGCCSCCA-----
---------GCCGCCATCTTG
 A G T C G T A C G A T C G T A C A T G C A G T C C G A T A T G C C G A T A C T G A G T C A G T C A T G C G T A C A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CCCMSCWSWGCCSCCA
-------CTGCCCGCA
 A G T C G T A C G A T C G T A C A T G C A G T C C G A T A T G C C G A T A C T G A G T C A G T C A T G C G T A C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

RREB1/MA0073.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCCMSCWSWGCCSCCA---
CCCCAAACCACCCCCCCCCA
 A C G T A G T C G T A C G A T C G T A C A T G C A G T C C G A T A T G C C G A T A C T G A G T C A G T C A T G C G T A C A G T C G T C A A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CCCMSCWSWGCCSCCA-
-----CCCCTCCCCCAC
 A G T C G T A C G A T C G T A C A T G C A G T C C G A T A T G C C G A T A C T G A G T C A G T C A T G C G T A C A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

YY2/MA0748.1/Jaspar

Match Rank:9
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CCCMSCWSWGCCSCCA---
--------GTCCGCCATTA
 A G T C G T A C G A T C G T A C A T G C A G T C C G A T A T G C C G A T A C T G A G T C A G T C A T G C G T A C A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

ZNF740/MA0753.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCCMSCWSWGCCSCCA
CCCCCCCCAC--------
 A C G T A C G T A G T C G T A C G A T C G T A C A T G C A G T C C G A T A T G C C G A T A C T G A G T C A G T C A T G C G T A C A G T C G T C A
T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T