Information for 8-TGGCTGCCTTCCT (Motif 11)

A C G T A C T G A T C G A G T C A C G T A C T G A T G C A G T C C G A T A C G T A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G C G T A C G T A A C T G A T C G G T A C C G T A A C T G A T G C A G T C C G T A
p-value:1e-9
log p-value:-2.097e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.5 +/- 24.7bp
Average Position of motif in Background56.8 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGCCTTCCT
CTGGCAGNCTGCCA
 A C G T A C G T A C T G A T C G A G T C A C G T A C T G A T G C A G T C C G A T A C G T A G T C A G T C C G A T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGCTGCCTTCCT---
CCTTCCTTCCTTCCTTCC
 A C G T A C G T A C G T A C T G A T C G A G T C A C G T A C T G A T G C A G T C C G A T A C G T A G T C A G T C C G A T A C G T A C G T A C G T
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGGCTGCCTTCCT-
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T A C T G A T C G A G T C A C G T A C T G A T G C A G T C C G A T A C G T A G T C A G T C C G A T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGGCTGCCTTCCT---
----NNAYTTCCTGHN
 A C G T A C T G A T C G A G T C A C G T A C T G A T G C A G T C C G A T A C G T A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGGCTGCCTTCCT---
------ACTTCCTGBT
 A C G T A C T G A T C G A G T C A C G T A C T G A T G C A G T C C G A T A C G T A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TGGCTGCCTTCCT---
------ACTTCCTGNT
 A C G T A C T G A T C G A G T C A C G T A C T G A T G C A G T C C G A T A C G T A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGGCTGCCTTCCT
TTGGCATGGTGCCA
 A C G T A C G T A C T G A T C G A G T C A C G T A C T G A T G C A G T C C G A T A C G T A G T C A G T C C G A T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGCCTTCCT
TWGTCTGV------
 A C G T A C G T A C T G A T C G A G T C A C G T A C T G A T G C A G T C C G A T A C G T A G T C A G T C C G A T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGGCTGCCTTCCT
------GCTTCC-
 A C G T A C T G A T C G A G T C A C G T A C T G A T G C A G T C C G A T A C G T A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TGGCTGCCTTCCT--
-------CTTCCGGT
 A C G T A C T G A T C G A G T C A C G T A C T G A T G C A G T C C G A T A C G T A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T