Information for 5-GCTAAAAAAAAAA (Motif 9)

A C T G A T G C G A C T G T C A C T G A C T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G C T A G C T A C G T A G C T A G C T A G C T A C G T C T G A A T C G G T A C
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.816
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.3 +/- 31.2bp
Average Position of motif in Background40.1 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GCTAAAAAAAAAA----
GTTAAAAAAAAAAATTA
 A C T G A T G C G A C T G T C A C T G A C T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GCTAAAAAAAAAA----
GTTCAAAAAAAAAATTC
 A C T G A T G C G A C T G T C A C T G A C T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCTAAAAAAAAAA
TACTGGAAAAAAAA
 A C G T A C T G A T G C G A C T G T C A C T G A C T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0186.1_Tcf3_2/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCTAAAAAAAAAA
AGCCGAAAAAAAAAT
 A C G T A C G T A C T G A T G C G A C T G T C A C T G A C T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTAAAAAAAAAA--
TGCCAAAATAAACANN
 A C G T A C T G A T G C G A C T G T C A C T G A C T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTAAAAAAAAAA--
AACAAACAACAAGAG
 A C T G A T G C G A C T G T C A C T G A C T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCTAAAAAAAAAA
ATGCTAAAAATAGAA
 A C G T A C G T A C T G A T G C G A C T G T C A C T G A C T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTAAAAAAAAAA
AAATAAGAAAAAAC
 A C G T A C T G A T G C G A C T G T C A C T G A C T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCTAAAAAAAAAA-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C T G A T G C G A C T G T C A C T G A C T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCTAAAAAAAAAA-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C T G A T G C G A C T G T C A C T G A C T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A