Information for 12-GGCCRGTCCAAAG (Motif 21)

A T C G A C T G A T G C G T A C T C A G A C T G C A G T A T G C A G T C G T C A T C G A C G T A A C T G
Reverse Opposite:
A G T C A C G T A G C T A C G T C T A G T A C G G T C A A G T C A G T C A C T G A T C G T G A C A T G C
p-value:1e-8
log p-value:-1.999e+01
Information Content per bp:1.744
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif79.4
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets51.9 +/- 25.1bp
Average Position of motif in Background50.2 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGCCRGTCCAAAG----
--AGAGTCCAAAGTCCA
 A T C G A C T G A T G C G T A C T C A G A C T G C A G T A T G C A G T C G T C A T C G A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGCCRGTCCAAAG----
-CANAGNNCAAAGTCCA
 A T C G A C T G A T G C G T A C T C A G A C T G C A G T A T G C A G T C G T C A T C G A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGCCRGTCCAAAG-
----GGAACAAAGR
 A T C G A C T G A T G C G T A C T C A G A C T G C A G T A T G C A G T C G T C A T C G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGCCRGTCCAAAG----
---NTGCCCANNGGTNA
 A T C G A C T G A T G C G T A C T C A G A C T G C A G T A T G C A G T C G T C A T C G A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGCCRGTCCAAAG-
----ACATCAAAGG
 A T C G A C T G A T G C G T A C T C A G A C T G C A G T A T G C A G T C G T C A T C G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGCCRGTCCAAAG----
--GTAGGGCAAAGGTCA
 A T C G A C T G A T G C G T A C T C A G A C T G C A G T A T G C A G T C G T C A T C G A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGCCRGTCCAAAG---
----ACATCAAAGGNA
 A T C G A C T G A T G C G T A C T C A G A C T G C A G T A T G C A G T C G T C A T C G A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGCCRGTCCAAAG-----
-NNNAGATCAAAGGANNN
 A T C G A C T G A T G C G T A C T C A G A C T G C A G T A T G C A G T C G T C A T C G A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGCCRGTCCAAAG-----
-NANAGATCAAAGGGNNN
 A T C G A C T G A T G C G T A C T C A G A C T G C A G T A T G C A G T C G T C A T C G A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGCCRGTCCAAAG---
--AAAGATCAAAGGAA
 A T C G A C T G A T G C G T A C T C A G A C T G C A G T A T G C A G T C G T C A T C G A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A