Information for 7-GGGCAGAGGTTTT (Motif 11)

A C T G T A C G A C T G T G A C C G T A A C T G C T G A C T A G A C T G A C G T A G C T G A C T C A G T
Reverse Opposite:
G C T A C G T A C T G A C G T A A G T C A G T C G A C T A G T C C G A T A C T G A G T C A T G C A G T C
p-value:1e-10
log p-value:-2.431e+01
Information Content per bp:1.800
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.3 +/- 29.4bp
Average Position of motif in Background45.7 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGGCAGAGGTTTT
-TGCTGTGATTT-
 A C T G T A C G A C T G T G A C C G T A A C T G C T G A C T A G A C T G A C G T A G C T G A C T C A G T
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGCAGAGGTTTT
TAGGGCAAAGGTCA-
 A C G T A C G T A C T G T A C G A C T G T G A C C G T A A C T G C T G A C T A G A C T G A C G T A G C T G A C T C A G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGGCAGAGGTTTT
--GCAGTGATTT-
 A C T G T A C G A C T G T G A C C G T A A C T G C T G A C T A G A C T G A C G T A G C T G A C T C A G T
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGAGGTTTT
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T A C T G T A C G A C T G T G A C C G T A A C T G C T G A C T A G A C T G A C G T A G C T G A C T C A G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAGAGGTTTT
TGGGGCAAAGGTCA-
 A C G T A C G T A C T G T A C G A C T G T G A C C G T A A C T G C T G A C T A G A C T G A C G T A G C T G A C T C A G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGAGGTTTT
AGGGGTCAGAGGTCA-
 A C G T A C G T A C G T A C T G T A C G A C T G T G A C C G T A A C T G C T G A C T A G A C T G A C G T A G C T G A C T C A G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGAGGTTTT
TNNGGGCAG-------
 A C G T A C G T A C G T A C T G T A C G A C T G T G A C C G T A A C T G C T G A C T A G A C T G A C G T A G C T G A C T C A G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGGCAGAGGTTTT
--GCTGTGGTTT-
 A C T G T A C G A C T G T G A C C G T A A C T G C T G A C T A G A C T G A C G T A G C T G A C T C A G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGGCAGAGGTTTT
--NNTGTGGTTT-
 A C T G T A C G A C T G T G A C C G T A A C T G C T G A C T A G A C T G A C G T A G C T G A C T C A G T
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGAGGTTTT
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T A C T G T A C G A C T G T G A C C G T A A C T G C T G A C T A G A C T G A C G T A G C T G A C T C A G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T