Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 729)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 22701)	% of Background Sequences with Motif
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-91	-2.104e+02	0.0000	177.0	24.28%	803.6	3.54%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-91	-2.097e+02	0.0000	211.0	28.94%	1222.4	5.39%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-88	-2.045e+02	0.0000	199.0	27.30%	1100.3	4.85%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-88	-2.035e+02	0.0000	168.0	23.05%	739.9	3.26%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-78	-1.806e+02	0.0000	237.0	32.51%	1838.8	8.11%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-64	-1.479e+02	0.0000	158.0	21.67%	949.4	4.19%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-53	-1.221e+02	0.0000	128.0	17.56%	743.0	3.28%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-43	-9.998e+01	0.0000	100.0	13.72%	543.5	2.40%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e-30	-7.089e+01	0.0000	84.0	11.52%	548.4	2.42%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-23	-5.364e+01	0.0000	60.0	8.23%	368.8	1.63%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-17	-4.070e+01	0.0000	81.0	11.11%	827.1	3.65%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-16	-3.798e+01	0.0000	41.0	5.62%	244.6	1.08%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-15	-3.643e+01	0.0000	84.0	11.52%	948.3	4.18%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-15	-3.576e+01	0.0000	71.0	9.74%	724.2	3.19%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-15	-3.474e+01	0.0000	71.0	9.74%	739.9	3.26%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-14	-3.266e+01	0.0000	140.0	19.20%	2204.2	9.72%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-14	-3.263e+01	0.0000	46.0	6.31%	359.0	1.58%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-14	-3.259e+01	0.0000	60.0	8.23%	580.9	2.56%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e-14	-3.230e+01	0.0000	71.0	9.74%	777.8	3.43%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-14	-3.227e+01	0.0000	66.0	9.05%	688.4	3.04%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-13	-3.223e+01	0.0000	55.0	7.54%	502.8	2.22%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e-13	-3.173e+01	0.0000	102.0	13.99%	1396.7	6.16%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-13	-3.080e+01	0.0000	60.0	8.23%	605.3	2.67%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-13	-3.040e+01	0.0000	66.0	9.05%	717.2	3.16%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e-13	-3.026e+01	0.0000	125.0	17.15%	1932.9	8.52%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-12	-2.988e+01	0.0000	70.0	9.60%	799.3	3.52%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-12	-2.914e+01	0.0000	83.0	11.39%	1064.0	4.69%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e-12	-2.908e+01	0.0000	64.0	8.78%	702.3	3.10%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e-12	-2.871e+01	0.0000	125.0	17.15%	1976.4	8.72%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-12	-2.788e+01	0.0000	64.0	8.78%	722.6	3.19%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e-11	-2.760e+01	0.0000	57.0	7.82%	600.0	2.65%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-11	-2.737e+01	0.0000	36.0	4.94%	265.2	1.17%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e-11	-2.593e+01	0.0000	72.0	9.88%	911.1	4.02%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e-11	-2.592e+01	0.0000	274.0	37.59%	5907.4	26.05%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e-11	-2.538e+01	0.0000	78.0	10.70%	1043.7	4.60%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-10	-2.531e+01	0.0000	66.0	9.05%	806.5	3.56%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e-10	-2.417e+01	0.0000	168.0	23.05%	3167.2	13.97%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-10	-2.394e+01	0.0000	55.0	7.54%	623.6	2.75%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e-10	-2.318e+01	0.0000	48.0	6.58%	509.6	2.25%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e-9	-2.239e+01	0.0000	184.0	25.24%	3653.8	16.11%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-9	-2.128e+01	0.0000	52.0	7.13%	614.1	2.71%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-9	-2.088e+01	0.0000	27.0	3.70%	199.3	0.88%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-8	-2.033e+01	0.0000	12.0	1.65%	33.7	0.15%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e-8	-2.016e+01	0.0000	24.0	3.29%	164.8	0.73%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e-8	-1.958e+01	0.0000	67.0	9.19%	951.0	4.19%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e-8	-1.899e+01	0.0000	39.0	5.35%	415.3	1.83%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e-7	-1.635e+01	0.0000	18.0	2.47%	116.0	0.51%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-6	-1.597e+01	0.0000	11.0	1.51%	41.0	0.18%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-6	-1.387e+01	0.0000	59.0	8.09%	931.8	4.11%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-5	-1.328e+01	0.0000	56.0	7.68%	882.3	3.89%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-5	-1.300e+01	0.0000	23.0	3.16%	228.0	1.01%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-5	-1.256e+01	0.0000	9.0	1.23%	36.3	0.16%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-5	-1.210e+01	0.0000	12.0	1.65%	72.0	0.32%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-5	-1.159e+01	0.0001	23.0	3.16%	248.5	1.10%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-5	-1.153e+01	0.0001	64.0	8.78%	1123.8	4.96%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e-4	-1.095e+01	0.0001	14.0	1.92%	109.1	0.48%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e-4	-1.093e+01	0.0001	21.0	2.88%	223.1	0.98%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e-4	-1.059e+01	0.0002	48.0	6.58%	786.1	3.47%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e-4	-9.911e+00	0.0003	59.0	8.09%	1066.3	4.70%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-3	-8.497e+00	0.0012	50.0	6.86%	908.0	4.00%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-3	-8.313e+00	0.0015	93.0	12.76%	2002.6	8.83%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e-3	-8.297e+00	0.0015	11.0	1.51%	92.1	0.41%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-3	-7.729e+00	0.0025	166.0	22.77%	4047.1	17.85%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-3	-7.550e+00	0.0030	30.0	4.12%	478.5	2.11%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-3	-7.178e+00	0.0043	103.0	14.13%	2343.4	10.33%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-3	-7.059e+00	0.0047	73.0	10.01%	1553.9	6.85%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-3	-7.027e+00	0.0048	35.0	4.80%	609.0	2.69%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e-2	-6.598e+00	0.0073	97.0	13.31%	2222.8	9.80%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-2	-5.324e+00	0.0257	19.0	2.61%	302.0	1.33%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-2	-5.269e+00	0.0268	103.0	14.13%	2493.8	11.00%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-2	-5.062e+00	0.0325	45.0	6.17%	943.7	4.16%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-2	-4.974e+00	0.0350	9.0	1.23%	103.3	0.46%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e-2	-4.966e+00	0.0350	75.0	10.29%	1746.8	7.70%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e-2	-4.821e+00	0.0397	23.0	3.16%	409.6	1.81%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-2	-4.809e+00	0.0397	54.0	7.41%	1193.2	5.26%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-2	-4.783e+00	0.0401	89.0	12.21%	2146.3	9.46%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-2	-4.748e+00	0.0410	169.0	23.18%	4435.9	19.56%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-2	-4.664e+00	0.0440	73.0	10.01%	1715.7	7.57%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-1	-4.513e+00	0.0505	53.0	7.27%	1186.4	5.23%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-1	-4.377e+00	0.0572	54.0	7.41%	1222.2	5.39%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e-1	-4.316e+00	0.0600	7.0	0.96%	77.4	0.34%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e-1	-4.315e+00	0.0600	59.0	8.09%	1361.9	6.01%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e-1	-4.310e+00	0.0600	14.0	1.92%	220.2	0.97%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-1	-4.240e+00	0.0624	70.0	9.60%	1667.1	7.35%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-1	-4.127e+00	0.0691	28.0	3.84%	560.4	2.47%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-1	-4.113e+00	0.0692	42.0	5.76%	921.4	4.06%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e-1	-4.057e+00	0.0724	98.0	13.44%	2467.8	10.88%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-1	-3.983e+00	0.0771	25.0	3.43%	492.4	2.17%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-1	-3.870e+00	0.0853	22.0	3.02%	423.1	1.87%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-1	-3.729e+00	0.0972	24.0	3.29%	479.2	2.11%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e-1	-3.547e+00	0.1152	6.0	0.82%	71.2	0.31%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e-1	-3.446e+00	0.1261	81.0	11.11%	2048.9	9.03%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e-1	-3.374e+00	0.1341	10.0	1.37%	158.8	0.70%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e-1	-3.359e+00	0.1347	62.0	8.50%	1522.4	6.71%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-1	-3.210e+00	0.1547	33.0	4.53%	741.9	3.27%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e-1	-3.183e+00	0.1572	99.0	13.58%	2593.2	11.43%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e-1	-3.158e+00	0.1596	64.0	8.78%	1597.6	7.04%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-1	-3.143e+00	0.1603	53.0	7.27%	1291.9	5.70%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e-1	-3.081e+00	0.1689	12.0	1.65%	213.6	0.94%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e-1	-3.079e+00	0.1689	9.0	1.23%	144.9	0.64%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-1	-3.024e+00	0.1752	43.0	5.90%	1025.9	4.52%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e-1	-2.975e+00	0.1822	9.0	1.23%	147.3	0.65%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e-1	-2.949e+00	0.1851	21.0	2.88%	442.2	1.95%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-1	-2.906e+00	0.1914	127.0	17.42%	3447.0	15.20%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e-1	-2.890e+00	0.1927	43.0	5.90%	1036.3	4.57%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-1	-2.840e+00	0.2006	66.0	9.05%	1686.3	7.44%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e-1	-2.817e+00	0.2035	18.0	2.47%	372.7	1.64%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e-1	-2.809e+00	0.2035	7.0	0.96%	107.9	0.48%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-1	-2.753e+00	0.2128	99.0	13.58%	2649.0	11.68%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-1	-2.736e+00	0.2146	32.0	4.39%	747.5	3.30%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e-1	-2.713e+00	0.2176	2.0	0.27%	13.2	0.06%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-1	-2.653e+00	0.2288	26.0	3.57%	591.8	2.61%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-1	-2.641e+00	0.2296	138.0	18.93%	3814.0	16.82%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e-1	-2.617e+00	0.2333	24.0	3.29%	540.1	2.38%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-1	-2.541e+00	0.2493	55.0	7.54%	1405.1	6.20%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-1	-2.505e+00	0.2562	10.0	1.37%	186.4	0.82%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-1	-2.502e+00	0.2562	15.0	2.06%	311.2	1.37%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-1	-2.486e+00	0.2569	20.0	2.74%	442.7	1.95%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e-1	-2.481e+00	0.2569	42.0	5.76%	1044.2	4.60%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e-1	-2.479e+00	0.2569	7.0	0.96%	116.2	0.51%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e-1	-2.476e+00	0.2569	18.0	2.47%	390.6	1.72%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-1	-2.426e+00	0.2636	47.0	6.45%	1190.6	5.25%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-1	-2.370e+00	0.2766	204.0	27.98%	5844.7	25.77%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-1	-2.334e+00	0.2844	21.0	2.88%	479.0	2.11%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-2.276e+00	0.2992	39.0	5.35%	979.9	4.32%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-2.228e+00	0.3114	10.0	1.37%	197.7	0.87%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-2.209e+00	0.3148	11.0	1.51%	223.0	0.98%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-2.166e+00	0.3260	54.0	7.41%	1418.1	6.25%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-2.083e+00	0.3515	9.0	1.23%	178.9	0.79%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-2.077e+00	0.3515	13.0	1.78%	281.7	1.24%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-2.061e+00	0.3539	5.0	0.69%	82.3	0.36%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-2.040e+00	0.3586	13.0	1.78%	283.7	1.25%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-2.015e+00	0.3649	30.0	4.12%	750.2	3.31%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.997e+00	0.3689	11.0	1.51%	233.7	1.03%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.989e+00	0.3689	5.0	0.69%	84.3	0.37%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-1.980e+00	0.3695	43.0	5.90%	1123.9	4.96%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-1.941e+00	0.3813	12.0	1.65%	262.6	1.16%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-1.916e+00	0.3881	2.0	0.27%	21.5	0.09%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-1.908e+00	0.3885	7.0	0.96%	135.8	0.60%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-1.852e+00	0.4081	25.0	3.43%	624.2	2.75%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.815e+00	0.4206	12.0	1.65%	269.4	1.19%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-1.788e+00	0.4287	56.0	7.68%	1524.7	6.72%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-1.788e+00	0.4287	18.0	2.47%	434.2	1.91%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-1.766e+00	0.4323	34.0	4.66%	888.8	3.92%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-1.748e+00	0.4373	76.0	10.43%	2120.4	9.35%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-1.746e+00	0.4373	12.0	1.65%	273.9	1.21%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-1.731e+00	0.4386	40.0	5.49%	1065.5	4.70%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.728e+00	0.4386	4.0	0.55%	68.6	0.30%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-1.728e+00	0.4386	3.0	0.41%	45.4	0.20%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-1.699e+00	0.4439	31.0	4.25%	809.1	3.57%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-1.684e+00	0.4476	3.0	0.41%	46.0	0.20%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-1.651e+00	0.4595	13.0	1.78%	306.2	1.35%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-1.648e+00	0.4595	2.0	0.27%	25.3	0.11%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-1.648e+00	0.4595	2.0	0.27%	25.0	0.11%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.647e+00	0.4595	6.0	0.82%	120.5	0.53%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-1.637e+00	0.4595	29.0	3.98%	758.1	3.34%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-1.634e+00	0.4595	16.0	2.19%	390.3	1.72%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-1.634e+00	0.4595	27.0	3.70%	701.4	3.09%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.630e+00	0.4595	12.0	1.65%	280.8	1.24%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-1.627e+00	0.4595	11.0	1.51%	253.1	1.12%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-1.625e+00	0.4595	4.0	0.55%	71.5	0.32%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-1.570e+00	0.4674	36.0	4.94%	968.7	4.27%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-1.560e+00	0.4692	3.0	0.41%	49.6	0.22%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-1.497e+00	0.4965	55.0	7.54%	1537.1	6.78%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.471e+00	0.5069	35.0	4.80%	951.9	4.20%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-1.464e+00	0.5070	47.0	6.45%	1305.8	5.76%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-1.436e+00	0.5187	29.0	3.98%	780.3	3.44%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-1.430e+00	0.5187	2.0	0.27%	29.8	0.13%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-1.383e+00	0.5400	4.0	0.55%	79.8	0.35%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-1.372e+00	0.5431	27.0	3.70%	729.1	3.22%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-1.352e+00	0.5509	62.0	8.50%	1770.7	7.81%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.349e+00	0.5509	10.0	1.37%	243.4	1.07%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-1.329e+00	0.5572	20.0	2.74%	530.0	2.34%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-1.312e+00	0.5635	3.0	0.41%	56.5	0.25%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.310e+00	0.5635	29.0	3.98%	795.1	3.51%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-1.305e+00	0.5635	9.0	1.23%	218.8	0.96%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.277e+00	0.5733	4.0	0.55%	83.4	0.37%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-1.277e+00	0.5733	66.0	9.05%	1904.4	8.40%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.269e+00	0.5733	24.0	3.29%	653.0	2.88%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-1.267e+00	0.5733	52.0	7.13%	1485.2	6.55%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-1.234e+00	0.5854	28.0	3.84%	775.2	3.42%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-1.221e+00	0.5896	12.0	1.65%	309.3	1.36%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.204e+00	0.5969	4.0	0.55%	86.7	0.38%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.171e+00	0.6136	2.0	0.27%	35.2	0.16%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.145e+00	0.6261	5.0	0.69%	116.2	0.51%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-1.138e+00	0.6272	11.0	1.51%	287.3	1.27%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-1.128e+00	0.6303	24.0	3.29%	670.2	2.96%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-1.108e+00	0.6391	74.0	10.15%	2181.4	9.62%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.103e+00	0.6391	9.0	1.23%	232.9	1.03%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.097e+00	0.6394	14.0	1.92%	378.4	1.67%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.084e+00	0.6449	13.0	1.78%	351.0	1.55%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-1.070e+00	0.6501	31.0	4.25%	887.3	3.91%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.054e+00	0.6576	21.0	2.88%	590.2	2.60%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-1.045e+00	0.6598	43.0	5.90%	1253.0	5.53%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-1.029e+00	0.6673	10.0	1.37%	267.2	1.18%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-1.016e+00	0.6725	5.0	0.69%	123.7	0.55%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-9.851e-01	0.6900	106.0	14.54%	3191.2	14.07%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-9.649e-01	0.7005	5.0	0.69%	126.8	0.56%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-9.618e-01	0.7005	3.0	0.41%	69.4	0.31%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-9.581e-01	0.7005	235.0	32.24%	7181.7	31.67%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-9.569e-01	0.7005	68.0	9.33%	2033.7	8.97%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-9.408e-01	0.7034	7.0	0.96%	186.9	0.82%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-8.981e-01	0.7304	25.0	3.43%	732.2	3.23%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-8.952e-01	0.7304	11.0	1.51%	310.0	1.37%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-8.792e-01	0.7371	4.0	0.55%	102.3	0.45%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-8.756e-01	0.7371	42.0	5.76%	1255.3	5.54%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-8.736e-01	0.7371	33.0	4.53%	980.1	4.32%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-8.648e-01	0.7371	1.0	0.14%	17.5	0.08%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-8.432e-01	0.7495	13.0	1.78%	375.8	1.66%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-8.347e-01	0.7523	10.0	1.37%	285.0	1.26%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-8.192e-01	0.7604	30.0	4.12%	898.5	3.96%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-7.963e-01	0.7744	10.0	1.37%	289.0	1.27%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-7.838e-01	0.7804	2.0	0.27%	48.6	0.21%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-7.820e-01	0.7804	4.0	0.55%	108.7	0.48%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-7.719e-01	0.7824	15.0	2.06%	445.1	1.96%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-7.613e-01	0.7871	49.0	6.72%	1496.8	6.60%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-7.451e-01	0.7962	3.0	0.41%	81.0	0.36%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-7.300e-01	0.8047	6.0	0.82%	173.5	0.77%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-7.146e-01	0.8134	13.0	1.78%	391.8	1.73%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-6.918e-01	0.8284	12.0	1.65%	363.5	1.60%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-6.841e-01	0.8310	52.0	7.13%	1609.5	7.10%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-6.701e-01	0.8389	34.0	4.66%	1052.9	4.64%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-6.533e-01	0.8493	26.0	3.57%	806.3	3.56%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-6.439e-01	0.8536	6.0	0.82%	181.0	0.80%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-6.372e-01	0.8554	16.0	2.19%	496.3	2.19%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-6.334e-01	0.8554	12.0	1.65%	371.9	1.64%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-6.323e-01	0.8554	76.0	10.43%	2373.5	10.47%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-6.033e-01	0.8733	2.0	0.27%	57.8	0.25%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-6.018e-01	0.8733	18.0	2.47%	565.4	2.49%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-5.863e-01	0.8805	2.0	0.27%	58.7	0.26%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-5.793e-01	0.8829	3.0	0.41%	91.9	0.41%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-5.715e-01	0.8860	13.0	1.78%	412.9	1.82%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-5.684e-01	0.8860	31.0	4.25%	982.5	4.33%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-5.562e-01	0.8919	16.0	2.19%	510.9	2.25%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-5.539e-01	0.8919	2.0	0.27%	60.6	0.27%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-5.535e-01	0.8919	3.0	0.41%	93.2	0.41%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-5.532e-01	0.8919	8.0	1.10%	255.9	1.13%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-5.473e-01	0.8919	10.0	1.37%	321.0	1.42%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-5.467e-01	0.8919	9.0	1.23%	288.8	1.27%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-5.467e-01	0.8919	9.0	1.23%	288.0	1.27%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-5.457e-01	0.8919	5.0	0.69%	159.8	0.70%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-5.384e-01	0.8919	2.0	0.27%	61.3	0.27%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-5.384e-01	0.8919	2.0	0.27%	61.6	0.27%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-5.330e-01	0.8919	24.0	3.29%	769.5	3.39%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-5.237e-01	0.8919	6.0	0.82%	194.3	0.86%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-5.226e-01	0.8919	26.0	3.57%	835.6	3.68%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-5.214e-01	0.8919	1.0	0.14%	28.3	0.12%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-5.186e-01	0.8919	14.0	1.92%	453.0	2.00%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-5.091e-01	0.8919	19.0	2.61%	615.6	2.71%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-4.999e-01	0.8919	5.0	0.69%	164.5	0.73%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-4.911e-01	0.8919	5.0	0.69%	165.2	0.73%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-4.897e-01	0.8919	17.0	2.33%	555.4	2.45%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-4.829e-01	0.8919	24.0	3.29%	781.5	3.45%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-4.811e-01	0.8919	2.0	0.27%	65.4	0.29%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-4.811e-01	0.8919	18.0	2.47%	589.3	2.60%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-4.796e-01	0.8919	1.0	0.14%	30.0	0.13%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-4.520e-01	0.9013	4.0	0.55%	136.7	0.60%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-4.467e-01	0.9026	11.0	1.51%	369.9	1.63%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-4.322e-01	0.9122	20.0	2.74%	665.0	2.93%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	-4.186e-01	0.9211	2.0	0.27%	70.3	0.31%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-4.120e-01	0.9237	8.0	1.10%	276.6	1.22%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-4.095e-01	0.9237	4.0	0.55%	141.7	0.62%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-4.015e-01	0.9263	4.0	0.55%	142.7	0.63%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-3.946e-01	0.9292	16.0	2.19%	544.9	2.40%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-3.921e-01	0.9292	1.0	0.14%	35.9	0.16%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-3.848e-01	0.9313	29.0	3.98%	970.3	4.28%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-3.843e-01	0.9313	76.0	10.43%	2475.8	10.92%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-3.838e-01	0.9313	22.0	3.02%	743.8	3.28%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-3.838e-01	0.9313	53.0	7.27%	1742.4	7.68%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-3.787e-01	0.9313	6.0	0.82%	214.7	0.95%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-3.761e-01	0.9313	11.0	1.51%	383.8	1.69%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-3.739e-01	0.9313	13.0	1.78%	450.9	1.99%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-3.456e-01	0.9438	30.0	4.12%	1016.8	4.48%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-3.428e-01	0.9438	12.0	1.65%	424.3	1.87%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-3.357e-01	0.9462	1.0	0.14%	39.7	0.17%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-3.281e-01	0.9499	10.0	1.37%	360.3	1.59%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-3.084e-01	0.9653	8.0	1.10%	296.5	1.31%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-3.066e-01	0.9653	3.0	0.41%	120.0	0.53%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-2.997e-01	0.9668	3.0	0.41%	120.3	0.53%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-2.884e-01	0.9743	60.0	8.23%	2014.5	8.88%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-2.774e-01	0.9815	2.0	0.27%	85.5	0.38%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-2.693e-01	0.9861	4.0	0.55%	162.3	0.72%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-2.670e-01	0.9861	18.0	2.47%	649.0	2.86%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-2.614e-01	0.9868	12.0	1.65%	446.4	1.97%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-2.526e-01	0.9921	7.0	0.96%	274.0	1.21%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-2.507e-01	0.9921	18.0	2.47%	654.6	2.89%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-2.435e-01	0.9942	11.0	1.51%	417.9	1.84%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-2.409e-01	0.9942	6.0	0.82%	241.5	1.06%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-2.357e-01	0.9950	8.0	1.10%	315.0	1.39%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-2.294e-01	0.9978	7.0	0.96%	280.3	1.24%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-2.192e-01	1.0000	64.0	8.78%	2188.5	9.65%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-2.071e-01	1.0000	14.0	1.92%	534.5	2.36%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-2.004e-01	1.0000	2.0	0.27%	97.7	0.43%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-1.960e-01	1.0000	40.0	5.49%	1417.4	6.25%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-1.950e-01	1.0000	2.0	0.27%	98.8	0.44%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-1.794e-01	1.0000	6.0	0.82%	258.8	1.14%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-1.743e-01	1.0000	9.0	1.23%	370.2	1.63%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.715e-01	1.0000	28.0	3.84%	1031.0	4.55%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.658e-01	1.0000	2.0	0.27%	104.5	0.46%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-1.586e-01	1.0000	6.0	0.82%	265.4	1.17%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-1.569e-01	1.0000	9.0	1.23%	377.7	1.67%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-1.489e-01	1.0000	13.0	1.78%	525.6	2.32%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-1.461e-01	1.0000	1.0	0.14%	62.8	0.28%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-1.397e-01	1.0000	30.0	4.12%	1121.1	4.94%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.372e-01	1.0000	32.0	4.39%	1191.0	5.25%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-1.363e-01	1.0000	1.0	0.14%	64.5	0.28%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-1.356e-01	1.0000	5.0	0.69%	235.3	1.04%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-1.356e-01	1.0000	5.0	0.69%	235.8	1.04%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.229e-01	1.0000	1.0	0.14%	68.0	0.30%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-1.076e-01	1.0000	2.0	0.27%	120.3	0.53%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-9.651e-02	1.0000	2.0	0.27%	124.3	0.55%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-9.465e-02	1.0000	16.0	2.19%	668.4	2.95%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-8.200e-02	1.0000	2.0	0.27%	130.3	0.57%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-8.181e-02	1.0000	1.0	0.14%	79.9	0.35%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-7.980e-02	1.0000	2.0	0.27%	131.2	0.58%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-7.763e-02	1.0000	13.0	1.78%	573.0	2.53%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-7.378e-02	1.0000	41.0	5.62%	1567.6	6.91%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-7.198e-02	1.0000	4.0	0.55%	225.9	1.00%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-6.972e-02	1.0000	140.0	19.20%	4851.6	21.39%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-6.893e-02	1.0000	36.0	4.94%	1402.3	6.18%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-5.850e-02	1.0000	6.0	0.82%	319.9	1.41%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-5.840e-02	1.0000	12.0	1.65%	555.1	2.45%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-5.734e-02	1.0000	11.0	1.51%	518.3	2.29%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-5.726e-02	1.0000	8.0	1.10%	401.0	1.77%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-5.722e-02	1.0000	103.0	14.13%	3676.7	16.21%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-5.689e-02	1.0000	3.0	0.41%	191.8	0.85%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-5.644e-02	1.0000	48.0	6.58%	1837.4	8.10%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-5.302e-02	1.0000	1.0	0.14%	92.9	0.41%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-5.302e-02	1.0000	1.0	0.14%	92.9	0.41%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-5.130e-02	1.0000	1.0	0.14%	93.4	0.41%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-4.354e-02	1.0000	3.0	0.41%	202.4	0.89%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-4.348e-02	1.0000	1.0	0.14%	98.7	0.44%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-4.310e-02	1.0000	64.0	8.78%	2414.1	10.65%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-3.939e-02	1.0000	1.0	0.14%	101.0	0.45%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-2.821e-02	1.0000	6.0	0.82%	357.0	1.57%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-2.644e-02	1.0000	45.0	6.17%	1814.3	8.00%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-2.103e-02	1.0000	19.0	2.61%	892.3	3.93%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.466e-02	1.0000	17.0	2.33%	840.4	3.71%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-1.110e-02	1.0000	10.0	1.37%	575.1	2.54%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-1.018e-02	1.0000	60.0	8.23%	2436.3	10.74%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-3.204e-03	1.0000	128.0	17.56%	4889.0	21.56%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-3.083e-03	1.0000	2.0	0.27%	247.6	1.09%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-1.352e-03	1.0000	37.0	5.08%	1776.0	7.83%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-2.220e-04	1.0000	5.0	0.69%	517.1	2.28%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-1.000e-06	1.0000	22.0	3.02%	1612.0	7.11%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-0.000e+00	1.0000	30.0	4.12%	2004.4	8.84%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	0.000e+00	1.0000	0.0	0.00%	72.4	0.32%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	14.6	0.06%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	9.5	0.04%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	0.000e+00	1.0000	0.0	0.00%	106.0	0.47%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	11.6	0.05%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	4.0	0.02%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	0.000e+00	1.0000	0.0	0.00%	40.3	0.18%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	18.7	0.08%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	11.6	0.05%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	28.1	0.12%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	6.4	0.03%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	14.8	0.07%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	11.5	0.05%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	1.6	0.01%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	4.7	0.02%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	17.4	0.08%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	7.5	0.03%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	0.000e+00	1.0000	0.0	0.00%	49.4	0.22%