p-value: | 1e-7 |
log p-value: | -1.661e+01 |
Information Content per bp: | 1.755 |
Number of Target Sequences with motif | 18.0 |
Percentage of Target Sequences with motif | 2.47% |
Number of Background Sequences with motif | 114.8 |
Percentage of Background Sequences with motif | 0.51% |
Average Position of motif in Targets | 56.4 +/- 26.8bp |
Average Position of motif in Background | 52.9 +/- 31.7bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.73 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AKCCATCATC GGCCATTAAC |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 2 |
Score: | 0.72 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AKCCATCATC GYCATCMATCAT- |
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Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AKCCATCATC AAACMATTAN- |
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PH0017.1_Cux1_2/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AKCCATCATC---- TAGTGATCATCATTA |
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Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer
Match Rank: | 5 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AKCCATCATC --YCATTAMC |
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Atf3/MA0605.1/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AKCCATCATC --ACGTCATC |
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PB0185.1_Tcf1_2/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AKCCATCATC------- ---NNTAATCCNGNCNN |
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EN2/MA0642.1/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AKCCATCATC CCCAATTAGC |
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OTX1/MA0711.1/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AKCCATCATC-- ----TTAATCCG |
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AKCCATCATC TCATCAATCA-- |
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