p-value: | 1e-9 |
log p-value: | -2.202e+01 |
Information Content per bp: | 1.928 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.69% |
Number of Background Sequences with motif | 0.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 50.8 +/- 16.2bp |
Average Position of motif in Background | 44.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 1 |
Score: | 0.75 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TAGAAGCCAGACG ---ATGCCAGACN |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 2 |
Score: | 0.71 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TAGAAGCCAGACG----- -CAAATCCAGACATCACA |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.68 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TAGAAGCCAGACG--- ------CCAGACRSVB |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.68 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TAGAAGCCAGACG- ------CCAGACAG |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 5 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TAGAAGCCAGACG- -AGGTGNCAGACAG |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TAGAAGCCAGACG -AGGTGHCAGACA |
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Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TAGAAGCCAGACG TGACANARRCCAGRC- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TAGAAGCCAGACG- ------BCAGACWA |
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POL008.1_DCE_S_I/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TAGAAGCCAGACG -NGAAGC------ |
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NFIC/MA0161.1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TAGAAGCCAGACG ----TGCCAA--- |
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