p-value: | 1e-8 |
log p-value: | -1.955e+01 |
Information Content per bp: | 1.906 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.88% |
Number of Background Sequences with motif | 13.8 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 48.3 +/- 10.8bp |
Average Position of motif in Background | 48.3 +/- 22.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
Match Rank: | 1 |
Score: | 0.74 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCCCATTAGW -BCMATTAG- |
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BSX/MA0876.1/Jaspar
Match Rank: | 2 |
Score: | 0.73 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCCATTAGW -CCAATTAA- |
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BARX1/MA0875.1/Jaspar
Match Rank: | 3 |
Score: | 0.73 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCCATTAGW -GCAATTAG- |
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VENTX/MA0724.1/Jaspar
Match Rank: | 4 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCCCATTAGW ACCGATTAG- |
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Barhl1/MA0877.1/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCCCATTAGW NNCAATTANN |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 6 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCCCATTAGW GGCCATTAAC |
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MSX2/MA0708.1/Jaspar
Match Rank: | 7 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCCATTAGW -CCAATTAA- |
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Nobox/MA0125.1/Jaspar
Match Rank: | 8 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCCCATTAGW ACCAATTA-- |
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MSX1/MA0666.1/Jaspar
Match Rank: | 9 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCCATTAGW -CCAATTAG- |
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GSX2/MA0893.1/Jaspar
Match Rank: | 10 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCCCATTAGW ACTAATTAAA |
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