Information for 11-TGCGCCCTGCAGC (Motif 16)

A C G T A C T G A T G C A C T G A T G C A G T C A G T C C G A T A C T G A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A G T C C G T A A C T G A C T G A T C G A G T C T A C G A G T C C G T A
p-value:1e-9
log p-value:-2.300e+01
Information Content per bp:1.909
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.5 +/- 8.7bp
Average Position of motif in Background39.5 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCGCCCTGCAGC--
GGCCYCCTGCTGDGH
 A C G T A C T G A T G C A C T G A T G C A G T C A G T C C G A T A C T G A G T C C G T A A C T G A G T C A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGCGCCCTGCAGC---
----CACAGCAGGGGG
 A C G T A C T G A T G C A C T G A T G C A G T C A G T C C G A T A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGCGCCCTGCAGC---
AATCGCACTGCATTCCG
 A C G T A C G T A C T G A T G C A C T G A T G C A G T C A G T C C G A T A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.54
Offset:9
Orientation:forward strand
Alignment:TGCGCCCTGCAGC-
---------CAGCC
 A C G T A C T G A T G C A C T G A T G C A G T C A G T C C G A T A C T G A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TGCGCCCTGCAGC-
------CAGCTGNT
 A C G T A C T G A T G C A C T G A T G C A G T C A G T C C G A T A C T G A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGCGCCCTGCAGC--
-NTGCCCANNGGTNA
 A C G T A C T G A T G C A C T G A T G C A G T C A G T C C G A T A C T G A G T C C G T A A C T G A G T C A C G T A C G T
A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCGCCCTGCAGC
TGGGGCCCAC---
 A C G T A C T G A T G C A C T G A T G C A G T C A G T C C G A T A C T G A G T C C G T A A C T G A G T C
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGCGCCCTGCAGC---
-CCACACAGCAGGAGA
 A C G T A C T G A T G C A C T G A T G C A G T C A G T C C G A T A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGCGCCCTGCAGC
--TGCCCAGNHW-
 A C G T A C T G A T G C A C T G A T G C A G T C A G T C C G A T A C T G A G T C C G T A A C T G A G T C
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TGCGCCCTGCAGC
AAGCATACGCCCAACTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A T G C A G T C A G T C C G A T A C T G A G T C C G T A A C T G A G T C
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T A C G T