Information for 5-ATHCATDATGAATATA (Motif 8)

G T C A A C G T G A T C A T G C C G T A C G A T C A T G G T C A A C G T C T A G G T C A C G T A A G C T C G T A A C G T C G T A
Reverse Opposite:
A C G T G T C A A C G T C T G A C G A T A C G T A G T C G T C A A C G T G A T C C G T A A C G T A T C G C A T G G T C A A C G T
p-value:1e-7
log p-value:-1.841e+01
Information Content per bp:1.706
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif26.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets36.8 +/- 32.2bp
Average Position of motif in Background46.8 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATHCATDATGAATATA
ATGCATWATGCATRW-
 G T C A A C G T G A T C A T G C C G T A C G A T C A T G G T C A A C G T C T A G G T C A C G T A A G C T C G T A A C G T C G T A
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.59
Offset:7
Orientation:forward strand
Alignment:ATHCATDATGAATATA-
-------ATGMATATDC
 G T C A A C G T G A T C A T G C C G T A C G A T C A T G G T C A A C G T C T A G G T C A C G T A A G C T C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PH0148.1_Pou3f3/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATHCATDATGAATATA--
-TNNATTATGCATANNTT
 G T C A A C G T G A T C A T G C C G T A C G A T C A T G G T C A A C G T C T A G G T C A C G T A A G C T C G T A A C G T C G T A A C G T A C G T
A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PB0198.1_Zfp128_2/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATHCATDATGAATATA--
----NNTATANATATACN
 G T C A A C G T G A T C A T G C C G T A C G A T C A T G G T C A A C G T C T A G G T C A C G T A A G C T C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:ATHCATDATGAATATA-
-------ATGAATATTC
 G T C A A C G T G A T C A T G C C G T A C G A T C A T G G T C A A C G T C T A G G T C A C G T A A G C T C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATHCATDATGAATATA
TGCCAAAATAAACANN
 G T C A A C G T G A T C A T G C C G T A C G A T C A T G G T C A A C G T C T A G G T C A C G T A A G C T C G T A A C G T C G T A
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PB0069.1_Sox21_1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATHCATDATGAATATA
NNTAATTATAATNANN
 G T C A A C G T G A T C A T G C C G T A C G A T C A T G G T C A A C G T C T A G G T C A C G T A A G C T C G T A A C G T C G T A
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

POU4F1/MA0790.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATHCATDATGAATATA
CATTAATTATTCAT---
 A C G T G T C A A C G T G A T C A T G C C G T A C G A T C A T G G T C A A C G T C T A G G T C A C G T A A G C T C G T A A C G T C G T A
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T A C G T A C G T A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ATHCATDATGAATATA
CTCATTAATTATGCAT---
 A C G T A C G T A C G T G T C A A C G T G A T C A T G C C G T A C G A T C A T G G T C A A C G T C T A G G T C A C G T A A G C T C G T A A C G T C G T A
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:forward strand
Alignment:ATHCATDATGAATATA------
------TAAGATTATAATACGG
 G T C A A C G T G A T C A T G C C G T A C G A T C A T G G T C A A C G T C T A G G T C A C G T A A G C T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G