Information for 17-CTATATACATATA (Motif 42)

A G T C A C G T C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A A C G T A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C T G
p-value:1e-3
log p-value:-7.024e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.0 +/- 0.0bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CTATATACATATA--
-TGTATATATATACC
 A G T C A C G T C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C G T
A C G T C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

PH0082.1_Irx2/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTATATACATATA-----
-TAAATACATGTAAAATT
 A G T C A C G T C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTATATACATATA-----
-AAAATACATGTAAAAAT
 A G T C A C G T C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

FOXB1/MA0845.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTATATACATATA
ATATTTACATA--
 A G T C A C G T C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G T A
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTATATACATATA--
TCTTTATATATAAATA
 A C G T A G T C A C G T C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTATATACATATA-----
-AATATACATGTAATATA
 A G T C A C G T C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTATATACATATA-----
-AATATACATGTAAAATT
 A G T C A C G T C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTATATACATATA----
--AYATGYATATGCATR
 A G T C A C G T C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTATATACATATA-----
-AAAATACATGTAATACT
 A G T C A C G T C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PB0163.1_Six6_2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CTATATACATATA
ATGGGATATATCCGCCT-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T C G T A
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T A C G T