Information for 15-CCTTGACCAA (Motif 37)

A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C T G A C T G
p-value:1e-3
log p-value:-7.024e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets82.0 +/- 0.0bp
Average Position of motif in Background40.3 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGACCAA
TGACCTTGACCT-
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGACCAA
TGACCTTGACCT-
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CCTTGACCAA----
ACCGTGACTAATTNN
 A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGACCAA
TGACCTTGAN---
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGACCAA
TGACCTTGAV---
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCTTGACCAA------
--TTGACCTANTTATN
 A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGACCAA
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCTTGACCAA
---TGACCT-
 A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCTTGACCAA---
---TGACCTARTT
 A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCTTGACCAA--
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G