Information for 8-CABVAAASCATGC (Motif 22)

A G T C C G T A A T C G T C G A T C G A T G C A C G T A A T C G A G T C T G C A C G A T C T A G T A G C
Reverse Opposite:
A C T G A G T C C G T A A C G T T C A G A T G C A C G T A C G T A C G T A C G T T A C G C G A T A C T G
p-value:1e-4
log p-value:-1.129e+01
Information Content per bp:1.626
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif7.50%
Number of Background Sequences with motif49.9
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets27.7 +/- 5.8bp
Average Position of motif in Background56.8 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CABVAAASCATGC--
GCAGCCAAGCGTGACN
 A C G T A G T C C G T A A T C G T C G A T C G A T G C A C G T A A T C G A G T C T G C A C G A T C T A G T A G C A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CABVAAASCATGC-
SCAGYCADGCATGAC
 A C G T A G T C C G T A A T C G T C G A T C G A T G C A C G T A A T C G A G T C T G C A C G A T C T A G T A G C A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PAX5/MA0014.2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CABVAAASCATGC-
GAGGGCAGCCAAGCGTGAC
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G T C G A T C G A T G C A C G T A A T C G A G T C T G C A C G A T C T A G T A G C A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CABVAAASCATGC
NACAGGAAAT-----
 A C G T A C G T A G T C C G T A A T C G T C G A T C G A T G C A C G T A A T C G A G T C T G C A C G A T C T A G T A G C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CABVAAASCATGC
NACAGGAAAT-----
 A C G T A C G T A G T C C G T A A T C G T C G A T C G A T G C A C G T A A T C G A G T C T G C A C G A T C T A G T A G C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CABVAAASCATGC
AAAGATCAAAGGAA--
 A C G T A C G T A C G T A G T C C G T A A T C G T C G A T C G A T G C A C G T A A T C G A G T C T G C A C G A T C T A G T A G C
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CABVAAASCATGC
ACATCAAAGGNA--
 A C G T A G T C C G T A A T C G T C G A T C G A T G C A C G T A A T C G A G T C T G C A C G A T C T A G T A G C
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CABVAAASCATGC
ATCACCCCAC-----
 A C G T A C G T A G T C C G T A A T C G T C G A T C G A T G C A C G T A A T C G A G T C T G C A C G A T C T A G T A G C
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CABVAAASCATGC
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G T C G A T C G A T G C A C G T A A T C G A G T C T G C A C G A T C T A G T A G C
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CABVAAASCATGC
CNGTCACGCCAC-----
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G T C G A T C G A T G C A C G T A A T C G A G T C T G C A C G A T C T A G T A G C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T A C G T A C G T