Information for 8-TSWRGYTKGSWGMRKT (Motif 12)

A C G T A T C G C G A T C T A G A C T G A G T C A C G T A C G T A C T G A T C G C G A T A C T G G T A C C T A G A C T G A C G T
Reverse Opposite:
C G T A G T A C A G T C C A G T A G T C C G T A A T G C A G T C G T C A C G T A C T A G A G T C A G T C G C A T A T G C C G T A
p-value:1e-6
log p-value:-1.604e+01
Information Content per bp:1.764
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif7.50%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.7 +/- 27.4bp
Average Position of motif in Background56.2 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TSWRGYTKGSWGMRKT
NNTGTGGTTT--------
 A C G T A C G T A C G T A T C G C G A T C T A G A C T G A G T C A C G T A C G T A C T G A T C G C G A T A C T G G T A C C T A G A C T G A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TSWRGYTKGSWGMRKT
CTGTGGTTTN-------
 A C G T A C G T A T C G C G A T C T A G A C T G A G T C A C G T A C G T A C T G A T C G C G A T A C T G G T A C C T A G A C T G A C G T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TSWRGYTKGSWGMRKT
GTCTGTGGTTT--------
 A C G T A C G T A C G T A C G T A T C G C G A T C T A G A C T G A G T C A C G T A C G T A C T G A T C G C G A T A C T G G T A C C T A G A C T G A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TSWRGYTKGSWGMRKT
NNHTGTGGTTWN-------
 A C G T A C G T A C G T A C G T A T C G C G A T C T A G A C T G A G T C A C G T A C G T A C T G A T C G C G A T A C T G G T A C C T A G A C T G A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TSWRGYTKGSWGMRKT
GCTGTGGTTT--------
 A C G T A C G T A C G T A T C G C G A T C T A G A C T G A G T C A C G T A C G T A C T G A T C G C G A T A C T G G T A C C T A G A C T G A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TSWRGYTKGSWGMRKT
GTCACGCTCNCTGA---
 A C G T A C G T A T C G C G A T C T A G A C T G A G T C A C G T A C G T A C T G A T C G C G A T A C T G G T A C C T A G A C T G A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TSWRGYTKGSWGMRKT
--AAGCTTG-------
 A C G T A T C G C G A T C T A G A C T G A G T C A C G T A C G T A C T G A T C G C G A T A C T G G T A C C T A G A C T G A C G T
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-TSWRGYTKGSWGMRKT
NGTAGGTTGGCATNNN-
 A C G T A C G T A T C G C G A T C T A G A C T G A G T C A C G T A C G T A C T G A T C G C G A T A C T G G T A C C T A G A C T G A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--TSWRGYTKGSWGMRKT
TTTGCGGTTT--------
 A C G T A C G T A C G T A T C G C G A T C T A G A C T G A G T C A C G T A C G T A C T G A T C G C G A T A C T G G T A C C T A G A C T G A C G T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:TSWRGYTKGSWGMRKT
-CAAGATGGCGGC---
 A C G T A T C G C G A T C T A G A C T G A G T C A C G T A C G T A C T G A T C G C G A T A C T G G T A C C T A G A C T G A C G T
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T