Information for 4-CCGGGTGAGAKGCCCC (Motif 11)

A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A T C G G T C A A C G T A C T G A G T C A G T C A T G C A G T C
Reverse Opposite:
A C T G A T C G A C T G A C T G A G T C T G A C A C G T A T G C A C G T G T A C C G T A A G T C A G T C G T A C A C T G A C T G
p-value:1e-8
log p-value:-2.040e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.2 +/- 26.7bp
Average Position of motif in Background11.3 +/- 0.9bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCGGGTGAGAKGCCCC
-CAGGTGAGG------
 A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A T C G G T C A A C G T A C T G A G T C A G T C A T G C A G T C
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCGGGTGAGAKGCCCC
CGCGCCGGGTCACGTA----
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A T C G G T C A A C G T A C T G A G T C A G T C A T G C A G T C
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCGGGTGAGAKGCCCC
AGGGGTCAGAGGTCA-
 A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A T C G G T C A A C G T A C T G A G T C A G T C A T G C A G T C
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCGGGTGAGAKGCCCC
---GGTTAGAGACCT-
 A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A T C G G T C A A C G T A C T G A G T C A G T C A T G C A G T C
A C G T A C G T A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CCGGGTGAGAKGCCCC------
----ATGCCACGCCCCTTTTTG
 A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A T C G G T C A A C G T A C T G A G T C A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CCGGGTGAGAKGCCCC
-CAGGTAAGTAT----
 A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A T C G G T C A A C G T A C T G A G T C A G T C A T G C A G T C
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CCGGGTGAGAKGCCCC
---RGTTAGTGCCCY-
 A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A T C G G T C A A C G T A C T G A G T C A G T C A T G C A G T C
A C G T A C G T A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.49
Offset:9
Orientation:forward strand
Alignment:CCGGGTGAGAKGCCCC---
---------AAGACCCYYN
 A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A T C G G T C A A C G T A C T G A G T C A G T C A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

SPDEF/MA0686.1/Jaspar

Match Rank:9
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----CCGGGTGAGAKGCCCC
TACATCCGGGT----------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A T C G G T C A A C G T A C T G A G T C A G T C A T G C A G T C
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CCGGGTGAGAKGCCCC
NNCAGGTGNN-------
 A C G T A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A T C G G T C A A C G T A C T G A G T C A G T C A T G C A G T C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T