Information for 7-CCGCCGGGACAGA (Motif 10)

A T G C A G T C A C T G A G T C A T G C A C T G A C T G A T C G C G T A A G T C C G T A A T C G C T G A
Reverse Opposite:
A G C T A T G C A C G T A C T G A C G T A T G C A G T C A G T C A T C G A C T G A G T C A C T G A T C G
p-value:1e-9
log p-value:-2.277e+01
Information Content per bp:1.903
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.1 +/- 29.0bp
Average Position of motif in Background58.9 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CCGCCGGGACAGA
--CCAGGAACAG-
 A T G C A G T C A C T G A G T C A T G C A C T G A C T G A T C G C G T A A G T C C G T A A T C G C T G A
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCGCCGGGACAGA--
CGCGCCGGGTCACGTA
 A C G T A T G C A G T C A C T G A G T C A T G C A C T G A C T G A T C G C G T A A G T C C G T A A T C G C T G A A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCGCCGGGACAGA
NTCCCCTCAGGGANT--
 A C G T A C G T A C G T A C G T A T G C A G T C A C T G A G T C A T G C A C T G A C T G A T C G C G T A A G T C C G T A A T C G C T G A
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCGGGACAGA
TCCCNNGGGACN--
 A C G T A T G C A G T C A C T G A G T C A T G C A C T G A C T G A T C G C G T A A G T C C G T A A T C G C T G A
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCGCCGGGACAGA--
AGAGCGGGGTCAAGTA
 A C G T A T G C A G T C A C T G A G T C A T G C A C T G A C T G A T C G C G T A A G T C C G T A A T C G C T G A A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCGCCGGGACAGA
NTCGCCTCAGGCAAT--
 A C G T A C G T A C G T A C G T A T G C A G T C A C T G A G T C A T G C A C T G A C T G A T C G C G T A A G T C C G T A A T C G C T G A
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCGCCGGGACAGA-
----TGGAACAGMA
 A T G C A G T C A C T G A G T C A T G C A C T G A C T G A T C G C G T A A G T C C G T A A T C G C T G A A C G T
A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCGCCGGGACAGA
ATTGCCTCAGGCAAT--
 A C G T A C G T A C G T A C G T A T G C A G T C A C T G A G T C A T G C A C T G A C T G A T C G C G T A A G T C C G T A A T C G C T G A
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCGCCGGGACAGA
-GGGCGGGAAGG-
 A T G C A G T C A C T G A G T C A T G C A C T G A C T G A T C G C G T A A G T C C G T A A T C G C T G A
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CCGCCGGGACAGA
-------CACAGN
 A T G C A G T C A C T G A G T C A T G C A C T G A C T G A T C G C G T A A G T C C G T A A T C G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C