Information for 9-TAATGCAAGAHGTTGC (Motif 17)

A C G T C G T A C G T A C G A T A T C G A G T C T G C A C T G A C T A G C G T A G A C T A T C G A G C T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C G T C A C T G A A T G C C G T A A C G T A G T C A G C T A C G T A C T G A T G C C G T A A C G T C G A T G T C A
p-value:1e-9
log p-value:-2.089e+01
Information Content per bp:1.774
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 22.1bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TAATGCAAGAHGTTGC
---ANCAGGATGT---
 A C G T C G T A C G T A C G A T A T C G A G T C T G C A C T G A C T A G C G T A G A C T A T C G A G C T A C G T A C T G A G T C
A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TAATGCAAGAHGTTGC
TAATCCCN--------
 A C G T C G T A C G T A C G A T A T C G A G T C T G C A C T G A C T A G C G T A G A C T A T C G A G C T A C G T A C T G A G T C
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TAATGCAAGAHGTTGC
--ATGCCAGACN----
 A C G T C G T A C G T A C G A T A T C G A G T C T G C A C T G A C T A G C G T A G A C T A T C G A G C T A C G T A C T G A G T C
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TAATGCAAGAHGTTGC---
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T C G T A C G T A C G A T A T C G A G T C T G C A C T G A C T A G C G T A G A C T A T C G A G C T A C G T A C T G A G T C A C G T A C G T A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TAATGCAAGAHGTTGC
TTAATCCC---------
 A C G T A C G T C G T A C G T A C G A T A T C G A G T C T G C A C T G A C T A G C G T A G A C T A T C G A G C T A C G T A C T G A G T C
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TAATGCAAGAHGTTGC
CTTAATCCC---------
 A C G T A C G T A C G T C G T A C G T A C G A T A T C G A G T C T G C A C T G A C T A G C G T A G A C T A T C G A G C T A C G T A C T G A G T C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TAATGCAAGAHGTTGC
----ACAGGATGTGGT
 A C G T C G T A C G T A C G A T A T C G A G T C T G C A C T G A C T A G C G T A G A C T A T C G A G C T A C G T A C T G A G T C
A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TAATGCAAGAHGTTGC
GCTAATCC----------
 A C G T A C G T A C G T C G T A C G T A C G A T A T C G A G T C T G C A C T G A C T A G C G T A G A C T A T C G A G C T A C G T A C T G A G T C
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TAATGCAAGAHGTTGC
YTAATCCY---------
 A C G T A C G T C G T A C G T A C G A T A T C G A G T C T G C A C T G A C T A G C G T A G A C T A T C G A G C T A C G T A C T G A G T C
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TAATGCAAGAHGTTGC
--ATGCAACAGGTGG-
 A C G T C G T A C G T A C G A T A T C G A G T C T G C A C T G A C T A G C G T A G A C T A T C G A G C T A C G T A C T G A G T C
A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T