Information for 1-CGGCACGTGC (Motif 1)

G T A C A T C G T C A G A T G C C T G A A G T C A C T G A G C T A T C G A T G C
Reverse Opposite:
T A C G A T G C T C G A A G T C C T A G A G C T A T C G A G T C A T G C C A T G
p-value:1e-31
log p-value:-7.208e+01
Information Content per bp:1.732
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif13.23%
Number of Background Sequences with motif1648.2
Percentage of Background Sequences with motif3.72%
Average Position of motif in Targets54.3 +/- 21.9bp
Average Position of motif in Background48.7 +/- 39.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HEY2/MA0649.1/Jaspar

Match Rank:1
Score:0.93
Offset:1
Orientation:forward strand
Alignment:CGGCACGTGC-
-GACACGTGCC
 G T A C A T C G T C A G A T G C C T G A A G T C A C T G A G C T A T C G A T G C A C G T
A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

HEY1/MA0823.1/Jaspar

Match Rank:2
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:CGGCACGTGC-
-GGCACGTGTC
 G T A C A T C G T C A G A T G C C T G A A G T C A C T G A G C T A T C G A T G C A C G T
A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

HES5/MA0821.1/Jaspar

Match Rank:3
Score:0.90
Offset:0
Orientation:forward strand
Alignment:CGGCACGTGC--
CGGCACGTGCCA
 G T A C A T C G T C A G A T G C C T G A A G T C A C T G A G C T A T C G A T G C A C G T A C G T
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

HES7/MA0822.1/Jaspar

Match Rank:4
Score:0.89
Offset:0
Orientation:forward strand
Alignment:CGGCACGTGC--
TGGCACGTGCCA
 G T A C A T C G T C A G A T G C C T G A A G T C A C T G A G C T A T C G A T G C A C G T A C G T
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:CGGCACGTGC-
-NNCGCGTGNN
 G T A C A T C G T C A G A T G C C T G A A G T C A C T G A G C T A T C G A T G C A C G T
A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

Hes2/MA0616.1/Jaspar

Match Rank:6
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---CGGCACGTGC
TAACGACACGTGC
 A C G T A C G T A C G T G T A C A T C G T C A G A T G C C T G A A G T C A C T G A G C T A T C G A T G C
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:CGGCACGTGC
NGKCACGTGM
 G T A C A T C G T C A G A T G C C T G A A G T C A C T G A G C T A T C G A T G C
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C

BHLHE40/MA0464.2/Jaspar

Match Rank:8
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:CGGCACGTGC-
-GTCACGTGAN
 G T A C A T C G T C A G A T G C C T G A A G T C A C T G A G C T A T C G A T G C A C G T
A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T

MNT/MA0825.1/Jaspar

Match Rank:9
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:CGGCACGTGC-
-NGCACGTGNT
 G T A C A T C G T C A G A T G C C T G A A G T C A C T G A G C T A T C G A T G C A C G T
A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T

Tcfl5/MA0632.1/Jaspar

Match Rank:10
Score:0.85
Offset:1
Orientation:forward strand
Alignment:CGGCACGTGC-
-GGCACGTGCC
 G T A C A T C G T C A G A T G C C T G A A G T C A C T G A G C T A T C G A T G C A C G T
A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C