Information for 1-GGGTCTGGTT (Motif 2)

C T A G A C T G A C T G A G C T A G T C A C G T A C T G A C T G G A C T C A G T
Reverse Opposite:
G T C A C T G A G T A C A G T C C G T A A C T G C T G A T G A C T G A C G A T C
p-value:1e-39
log p-value:-9.188e+01
Information Content per bp:1.726
Number of Target Sequences with motif148.0
Percentage of Target Sequences with motif18.36%
Number of Background Sequences with motif2412.4
Percentage of Background Sequences with motif5.18%
Average Position of motif in Targets50.2 +/- 22.3bp
Average Position of motif in Background50.4 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.87
Offset:1
Orientation:forward strand
Alignment:GGGTCTGGTT-
-GGTCTGGCAT
 C T A G A C T G A C T G A G C T A G T C A C G T A C T G A C T G G A C T C A G T A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----GGGTCTGGTT---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T C T A G A C T G A C T G A G C T A G T C A C G T A C T G A C T G G A C T C A G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GGGTCTGGTT
CTGTCTGG--
 C T A G A C T G A C T G A G C T A G T C A C G T A C T G A C T G G A C T C A G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GGGTCTGGTT
VBSYGTCTGG--
 A C G T A C G T C T A G A C T G A C T G A G C T A G T C A C G T A C T G A C T G G A C T C A G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGGTCTGGTT
TWGTCTGV--
 C T A G A C T G A C T G A G C T A G T C A C G T A C T G A C T G G A C T C A G T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGGTCTGGTT
NTGGGTGTGGCC
 A C G T A C G T C T A G A C T G A C T G A G C T A G T C A C G T A C T G A C T G G A C T C A G T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGGTCTGGTT
TGGGTGTGGC-
 A C G T C T A G A C T G A C T G A G C T A G T C A C G T A C T G A C T G G A C T C A G T
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T

Klf1/MA0493.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGGTCTGGTT
TGGGTGTGGCN
 A C G T C T A G A C T G A C T G A G C T A G T C A C G T A C T G A C T G G A C T C A G T
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGGTCTGGTT-------
--GYCTGGYYTNTGTCA
 C T A G A C T G A C T G A G C T A G T C A C G T A C T G A C T G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGGTCTGGTT--
GGNGCGNCTGTTNNN
 A C G T A C G T A C G T C T A G A C T G A C T G A G C T A G T C A C G T A C T G A C T G G A C T C A G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T