Information for 4-CCAGGAGGGCGGCCGA (Motif 6)

A G T C A G T C C G T A A C T G A C T G C G T A C A T G A C T G A C T G A G T C A C T G A C T G T G A C A G T C T A C G T C G A
Reverse Opposite:
A G C T A G T C A C T G A C T G A G T C G T A C T A C G G T A C A G T C G A T C G A C T A G T C G T A C A C G T A C T G A C T G
p-value:1e-11
log p-value:-2.641e+01
Information Content per bp:1.795
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 28.5bp
Average Position of motif in Background27.7 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCAGGAGGGCGGCCGA
-CAAGATGGCGGC---
 A G T C A G T C C G T A A C T G A C T G C G T A C A T G A C T G A C T G A G T C A C T G A C T G T G A C A G T C T A C G T C G A
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCAGGAGGGCGGCCGA
-CAGGTGAGG------
 A G T C A G T C C G T A A C T G A C T G C G T A C A T G A C T G A C T G A G T C A C T G A C T G T G A C A G T C T A C G T C G A
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCAGGAGGGCGGCCGA
-CAAGATGGCGGC---
 A G T C A G T C C G T A A C T G A C T G C G T A C A T G A C T G A C T G A G T C A C T G A C T G T G A C A G T C T A C G T C G A
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCAGGAGGGCGGCCGA
VCAGGTRDRY------
 A G T C A G T C C G T A A C T G A C T G C G T A C A T G A C T G A C T G A G T C A C T G A C T G T G A C A G T C T A C G T C G A
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCAGGAGGGCGGCCGA
-CTGGCAGNCTGCCA-
 A G T C A G T C C G T A A C T G A C T G C G T A C A T G A C T G A C T G A G T C A C T G A C T G T G A C A G T C T A C G T C G A
A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGAGGGCGGCCGA
NNCAGGTGNN-------
 A C G T A G T C A G T C C G T A A C T G A C T G C G T A C A T G A C T G A C T G A G T C A C T G A C T G T G A C A G T C T A C G T C G A
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCAGGAGGGCGGCCGA
CTTGGCANNNTGCCAA
 A G T C A G T C C G T A A C T G A C T G C G T A C A T G A C T G A C T G A G T C A C T G A C T G T G A C A G T C T A C G T C G A
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGAGGGCGGCCGA
ANCAGGATGT-------
 A C G T A G T C A G T C C G T A A C T G A C T G C G T A C A T G A C T G A C T G A G T C A C T G A C T G T G A C A G T C T A C G T C G A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGAGGGCGGCCGA
DCHCAGCAGGRGGCC---
 A C G T A C G T A G T C A G T C C G T A A C T G A C T G C G T A C A T G A C T G A C T G A G T C A C T G A C T G T G A C A G T C T A C G T C G A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGAGGGCGGCCGA
AACAGGTGNT-------
 A C G T A G T C A G T C C G T A A C T G A C T G C G T A C A T G A C T G A C T G A G T C A C T G A C T G T G A C A G T C T A C G T C G A
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T