Information for 12-CATGCGGGCT (Motif 21)

A G T C T C G A C A G T A C T G G T A C A C T G A C T G A T C G A G T C A C G T
Reverse Opposite:
C G T A A C T G A T G C A G T C A G T C A C T G A G T C G T C A A G C T A C T G
p-value:1e-7
log p-value:-1.758e+01
Information Content per bp:1.840
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.26%
Number of Background Sequences with motif460.8
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets53.1 +/- 27.5bp
Average Position of motif in Background51.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CATGCGGGCT
TATGCGGGTA
 A G T C T C G A C A G T A C T G G T A C A C T G A C T G A T C G A G T C A C G T
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CATGCGGGCT---
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T A G T C T C G A C A G T A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CATGCGGGCT-
CATGCGGGTAC
 A G T C T C G A C A G T A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C G T
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CATGCGGGCT--
----AGGCCTAG
 A G T C T C G A C A G T A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CATGCGGGCT-
--TNNGGGCAG
 A G T C T C G A C A G T A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CATGCGGGCT--
----AGGCCTNG
 A G T C T C G A C A G T A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CATGCGGGCT
--GGCGCGCT
 A G T C T C G A C A G T A C T G G T A C A C T G A C T G A T C G A G T C A C G T
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CATGCGGGCT-
TCACCTCTGGGCAG
 A C G T A C G T A C G T A G T C T C G A C A G T A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATGCGGGCT-
GCCTCAGGGCAT
 A C G T A G T C T C G A C A G T A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CATGCGGGCT-
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A G T C T C G A C A G T A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G