Information for 9-CGTCGGGGCA (Motif 13)

A T G C A C T G A G C T A T G C A C T G A C T G A T C G A C T G T G A C C G T A
Reverse Opposite:
C G A T A C T G A G T C A T G C A G T C T G A C A T C G T C G A G T A C A T C G
p-value:1e-9
log p-value:-2.088e+01
Information Content per bp:1.840
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif275.0
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets43.4 +/- 22.8bp
Average Position of motif in Background52.0 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGTCGGGGCA
WDNCTGGGCA
 A T G C A C T G A G C T A T G C A C T G A C T G A T C G A C T G T G A C C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CGTCGGGGCA----
CGCGCCGGGTCACGTA
 A C G T A C G T A T G C A C T G A G C T A T G C A C T G A C T G A T C G A C T G T G A C C G T A A C G T A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CGTCGGGGCA-
--TNNGGGCAG
 A T G C A C T G A G C T A T G C A C T G A C T G A T C G A C T G T G A C C G T A A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGTCGGGGCA-
--NGTGGGCAT
 A T G C A C T G A G C T A T G C A C T G A C T G A T C G A C T G T G A C C G T A A C G T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGTCGGGGCA
TGCCCTGAGGGCA
 A C G T A C G T A C G T A T G C A C T G A G C T A T G C A C T G A C T G A T C G A C T G T G A C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGTCGGGGCA-----
NNNNTTGGGCACNNCN
 A C G T A T G C A C T G A G C T A T G C A C T G A C T G A T C G A C T G T G A C C G T A A C G T A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGTCGGGGCA
TGCCCTNAGGGCA
 A C G T A C G T A C G T A T G C A C T G A G C T A T G C A C T G A C T G A T C G A C T G T G A C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGTCGGGGCA
TGCCCTGAGGGCA
 A C G T A C G T A C G T A T G C A C T G A G C T A T G C A C T G A C T G A T C G A C T G T G A C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGTCGGGGCA-
GCCTCAGGGCAT
 A C G T A T G C A C T G A G C T A T G C A C T G A C T G A T C G A C T G T G A C C G T A A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGTCGGGGCA----
AGAGCGGGGTCAAGTA
 A C G T A C G T A T G C A C T G A G C T A T G C A C T G A C T G A T C G A C T G T G A C C G T A A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A