Information for 18-CTTGTCATTG (Motif 29)

G T A C C G A T A C G T A C T G A G C T A G T C C G T A A C G T C G A T A T C G
Reverse Opposite:
T A G C C G T A G T C A C G A T C T A G T C G A T G A C G T C A C G T A A C T G
p-value:1e-5
log p-value:-1.216e+01
Information Content per bp:1.785
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif43.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets51.0 +/- 30.0bp
Average Position of motif in Background50.0 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTTGTCATTG
BNTGDCCTTG
 G T A C C G A T A C G T A C T G A G C T A G T C C G T A A C G T C G A T A T C G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTTGTCATTG
-NTGTCAN--
 G T A C C G A T A C G T A C T G A G C T A G T C C G T A A C G T C G A T A T C G
A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTTGTCATTG--
NCNTTTGTTATTTNN
 A C G T A C G T A C G T G T A C C G A T A C G T A C T G A G C T A G T C C G T A A C G T C G A T A T C G A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTTGTCATTG
-YTGWCADY-
 G T A C C G A T A C G T A C T G A G C T A G T C C G T A A C G T C G A T A T C G
A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTTGTCATTG
---GTCATN-
 G T A C C G A T A C G T A C T G A G C T A G T C C G T A A C G T C G A T A T C G
A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTTGTCATTG
CCTGTCAA--
 G T A C C G A T A C G T A C T G A G C T A G T C C G T A A C G T C G A T A T C G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTTGTCATTG--
---CTCATTGTC
 G T A C C G A T A C G T A C T G A G C T A G T C C G T A A C G T C G A T A T C G A C G T A C G T
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTTGTCATTG--
--TGACCTTGAV
 G T A C C G A T A C G T A C T G A G C T A G T C C G T A A C G T C G A T A T C G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTTGTCATTG
--TGTCANYT
 G T A C C G A T A C G T A C T G A G C T A G T C C G T A A C G T C G A T A T C G
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTTGTCATTG--
--TGACCTTGAN
 G T A C C G A T A C G T A C T G A G C T A G T C C G T A A C G T C G A T A T C G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A