Information for 19-TGCCAGGCAGCCT (Motif 25)

A C G T A C T G G T A C A T G C G T C A C T A G A C T G A G T C C G T A A C T G A G T C G T A C A G C T
Reverse Opposite:
C T G A A C T G A C T G T A G C C G A T C T A G A G T C A G T C A C G T A T C G C A T G A G T C G T C A
p-value:1e-7
log p-value:-1.809e+01
Information Content per bp:1.809
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif10.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.7 +/- 27.7bp
Average Position of motif in Background43.5 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGCCAGGCAGCCT
CTGGCAGNCTGCCA
 A C G T A C G T A C T G G T A C A T G C G T C A C T A G A C T G A G T C C G T A A C T G A G T C G T A C A G C T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGCCAGGCAGCCT
TTGCCAAG------
 A C G T A C G T A C T G G T A C A T G C G T C A C T A G A C T G A G T C C G T A A C T G A G T C G T A C A G C T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCCAGGCAGCCT
CGTGCCAAG------
 A C G T A C G T A C G T A C T G G T A C A T G C G T C A C T A G A C T G A G T C C G T A A C T G A G T C G T A C A G C T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TGCCAGGCAGCCT
ACTATGCCAACCTACC-
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C A T G C G T C A C T A G A C T G A G T C C G T A A C T G A G T C G T A C A G C T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGCCAGGCAGCCT
GGTGCCAAGT-----
 A C G T A C G T A C G T A C T G G T A C A T G C G T C A C T A G A C T G A G T C C G T A A C T G A G T C G T A C A G C T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCCAGGCAGCCT
TGCCAA-------
 A C G T A C T G G T A C A T G C G T C A C T A G A C T G A G T C C G T A A C T G A G T C G T A C A G C T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGCCAGGCAGCCT
ATGCCAACC-----
 A C G T A C G T A C T G G T A C A T G C G T C A C T A G A C T G A G T C C G T A A C T G A G T C G T A C A G C T
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCCAGGCAGCCT
KGTTGCTAGGMAACA-
 A C G T A C G T A C G T A C G T A C T G G T A C A T G C G T C A C T A G A C T G A G T C C G T A A C T G A G T C G T A C A G C T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCCAGGCAGCCT
ATGCCCACC-----
 A C G T A C G T A C T G G T A C A T G C G T C A C T A G A C T G A G T C C G T A A C T G A G T C G T A C A G C T
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGCCAGGCAGCCT
VBTGWCAGCB-----
 A C G T A C G T A C G T A C T G G T A C A T G C G T C A C T A G A C T G A G T C C G T A A C T G A G T C G T A C A G C T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T