Information for 13-CCTTGTTTTTCCTCCA (Motif 22)

A G T C A G T C A C G T A C G T A C T G A C G T A C G T C G A T A G C T A C G T A G T C A G T C A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T C T A G C T A G C G T A C T A G A C T G C G T A C T G A C G T A C G T A G T C A G T A C C G T A C G T A A C T G A C T G
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.851
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 28.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTTGTTTTTCCTCCA
CCTTTGTTTT------
 A G T C A G T C A C G T A C G T A C T G A C G T A C G T C G A T A G C T A C G T A G T C A G T C A C G T A G T C A G T C C G T A
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCTTGTTTTTCCTCCA
TNNTCCTTTGTTCTNNT---
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T C G A T A G C T A C G T A G T C A G T C A C G T A G T C A G T C C G T A
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCTTGTTTTTCCTCCA
NNNTCCTTTGTTCTNNN---
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T C G A T A G C T A C G T A G T C A G T C A C G T A G T C A G T C C G T A
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTTGTTTTTCCTCCA----
TTTTTTTTTTTTTTCAGGTT
 A G T C A G T C A C G T A C G T A C T G A C G T A C G T C G A T A G C T A C G T A G T C A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTTGTTTTTCCTCCA----
TTTTTTTTTTTTTTCAGGTT
 A G T C A G T C A C G T A C G T A C T G A C G T A C G T C G A T A G C T A C G T A G T C A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGTTTTTCCTCCA
NCNTTTGTTATTTNN---
 A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T C G A T A G C T A C G T A G T C A G T C A C G T A G T C A G T C C G T A
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCTTGTTTTTCCTCCA
CCTTTGTT--------
 A G T C A G T C A C G T A C G T A C T G A C G T A C G T C G A T A G C T A C G T A G T C A G T C A C G T A G T C A G T C C G T A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCTTGTTTTTCCTCCA
--TTTTTTTTCNNGTN
 A G T C A G T C A C G T A C G T A C T G A C G T A C G T C G A T A G C T A C G T A G T C A G T C A C G T A G T C A G T C C G T A
A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCTTGTTTTTCCTCCA
NTNTTGTTGTTTGTN--
 A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T C G A T A G C T A C G T A G T C A G T C A C G T A G T C A G T C C G T A
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGTTTTTCCTCCA
NNNNTTTTTTTTTNAAC-
 A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T C G A T A G C T A C G T A G T C A G T C A C G T A G T C A G T C C G T A
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T