Information for 6-CAATTTCCATGKAAAC (Motif 13)

G T A C C G T A C T G A A C G T A C G T C G A T A G T C A G T C C G T A C A G T A C T G A C G T G T C A G T C A C G T A A G T C
Reverse Opposite:
A C T G C G A T A C G T A C G T G T A C A G T C G C T A A C G T A C T G A C T G C G T A C G T A C G T A A G C T A C G T A C T G
p-value:1e-11
log p-value:-2.579e+01
Information Content per bp:1.831
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 30.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:CAATTTCCATGKAAAC-
---TTGCCATGGCAACC
 G T A C C G T A C T G A A C G T A C G T C G A T A G T C A G T C C G T A C A G T A C T G A C G T G T C A G T C A C G T A A G T C A C G T
A C G T A C G T A C G T A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CAATTTCCATGKAAAC-
---TTGCCATGGCAACN
 G T A C C G T A C T G A A C G T A C G T C G A T A G T C A G T C C G T A C A G T A C T G A C G T G T C A G T C A C G T A A G T C A C G T
A C G T A C G T A C G T A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CAATTTCCATGKAAAC-
--GTTGCCATGGCAACM
 G T A C C G T A C T G A A C G T A C G T C G A T A G T C A G T C C G T A C A G T A C T G A C G T G T C A G T C A C G T A A G T C A C G T
A C G T A C G T C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CAATTTCCATGKAAAC
CGGTTGCCATGGCAAC
 G T A C C G T A C T G A A C G T A C G T C G A T A G T C A G T C C G T A C A G T A C T G A C G T G T C A G T C A C G T A A G T C
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

RFX3/MA0798.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CAATTTCCATGKAAAC-
-CGTTGCCATGGCAACG
 G T A C C G T A C T G A A C G T A C G T C G A T A G T C A G T C C G T A C A G T A C T G A C G T G T C A G T C A C G T A A G T C A C G T
A C G T A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G

Rfx1/MA0509.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CAATTTCCATGKAAAC
--GTTGCCATGGCAAC
 G T A C C G T A C T G A A C G T A C G T C G A T A G T C A G T C C G T A C A G T A C T G A C G T G T C A G T C A C G T A A G T C
A C G T A C G T C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

RFX5/MA0510.2/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CAATTTCCATGKAAAC-
-NGTTGCCATGGCAACG
 G T A C C G T A C T G A A C G T A C G T C G A T A G T C A G T C C G T A C A G T A C T G A C G T G T C A G T C A C G T A A G T C A C G T
A C G T A T G C C T A G A C G T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T C G A G A T C T A C G

RFX2/MA0600.2/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CAATTTCCATGKAAAC-
-CGTTGCCATGGCAACG
 G T A C C G T A C T G A A C G T A C G T C G A T A G T C A G T C C G T A C A G T A C T G A C G T G T C A G T C A C G T A A G T C A C G T
A C G T A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A A G T C T A C G

RFX4/MA0799.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAATTTCCATGKAAAC-
-CGTTGCCATGGCAACG
 G T A C C G T A C T G A A C G T A C G T C G A T A G T C A G T C C G T A C A G T A C T G A C G T G T C A G T C A C G T A A G T C A C G T
A C G T A T G C C T A G G C A T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAATTTCCATGKAAAC
-ATTTTCCATT-----
 G T A C C G T A C T G A A C G T A C G T C G A T A G T C A G T C C G T A C A G T A C T G A C G T G T C A G T C A C G T A A G T C
A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T