Information for 12-AAGCCTAGGTACC (Motif 12)

C G T A C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G A C G T C T G A A G T C A G T C
Reverse Opposite:
A C T G C T A G A G C T C G T A A G T C A G T C A C G T G T C A A C T G C T A G A G T C A C G T A C G T
p-value:1e-11
log p-value:-2.579e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.2 +/- 7.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAGCCTAGGTACC--
TACCCTAGTTACCGA
 C G T A C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G A C G T C T G A A G T C A G T C A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGCCTAGGTACC----
ANNNCTAGTTAACNGNN
 C G T A C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G A C G T C T G A A G T C A G T C A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGCCTAGGTACC
AGGCCTNG-----
 C G T A C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G A C G T C T G A A G T C A G T C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AAGCCTAGGTACC
---ACTAGTTAAC
 C G T A C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G A C G T C T G A A G T C A G T C
A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGCCTAGGTACC
AGGCCTAG-----
 C G T A C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G A C G T C T G A A G T C A G T C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGCCTAGGTACC---
GAAAACTAGTTAACATC
 A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G A C G T C T G A A G T C A G T C A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AAGCCTAGGTACC
CAGGCCNNGGCCNN
 A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G A C G T C T G A A G T C A G T C
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Znf423/MA0116.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AAGCCTAGGTACC
GCACCCCTGGGTGCC
 A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G A C G T C T G A A G T C A G T C
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----AAGCCTAGGTACC------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G A C G T C T G A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAGCCTAGGTACC
CAAGCTT-------
 A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G A C G T C T G A A G T C A G T C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T