Information for 8-CTTTTAGATTAGCTCA (Motif 9)

G A T C G C A T C G A T A C G T A G C T C G T A C T A G C G T A A C G T G C A T C T G A A C T G G T A C A G C T A G T C G C T A
Reverse Opposite:
C G A T A C T G C T G A C A T G T A G C A G C T C G T A T G C A C G A T A G T C C G A T T C G A C G T A C G T A C G T A C A T G
p-value:1e-13
log p-value:-3.159e+01
Information Content per bp:1.690
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.8 +/- 16.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0014.1_Cphx/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTTTTAGATTAGCTCA-
---NTTGATTNNATCAN
 G A T C G C A T C G A T A C G T A G C T C G T A C T A G C G T A A C G T G C A T C T G A A C T G G T A C A G C T A G T C G C T A A C G T
A C G T A C G T A C G T C G A T A G C T C G A T C T A G C G T A A C G T A C G T A T G C T A C G G T C A A C G T A G T C C G T A G A C T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTTTTAGATTAGCTCA------
--NDBAGATRWTATCTVNNNNN
 G A T C G C A T C G A T A C G T A G C T C G T A C T A G C G T A A C G T G C A T C T G A A C T G G T A C A G C T A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

DUXA/MA0884.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTTTTAGATTAGCTCA-
----NTGATTAAATTAN
 G A T C G C A T C G A T A C G T A G C T C G T A C T A G C G T A A C G T G C A T C T G A A C T G G T A C A G C T A G T C G C T A A C G T
A C G T A C G T A C G T A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

Barhl1/MA0877.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTAGATTAGCTCA
NNCAATTANN--------
 A C G T A C G T G A T C G C A T C G A T A C G T A G C T C G T A C T A G C G T A A C G T G C A T C T G A A C T G G T A C A G C T A G T C G C T A
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0125.1_Gata3_2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTTTTAGATTAGCTCA-----
TTTTGTAGATTTTATCGACTTA
 A C G T G A T C G C A T C G A T A C G T A G C T C G T A C T A G C G T A A C G T G C A T C T G A A C T G G T A C A G C T A G T C G C T A A C G T A C G T A C G T A C G T A C G T
G A C T A C G T G C A T C A G T T C A G A G C T G C T A C T A G G C T A G A C T C G A T A C G T G A C T C T G A A C G T G A T C C T A G T C G A A T G C C G A T G C A T G T C A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTTTTAGATTAGCTCA-
---TATAAGTAGGTCAA
 G A T C G C A T C G A T A C G T A G C T C G T A C T A G C G T A A C G T G C A T C T G A A C T G G T A C A G C T A G T C G C T A A C G T
A C G T A C G T A C G T C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTAGATTAGCTCA
BCMATTAG---------
 A C G T G A T C G C A T C G A T A C G T A G C T C G T A C T A G C G T A A C G T G C A T C T G A A C T G G T A C A G C T A G T C G C T A
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTTTTAGATTAGCTCA
CCTTTTATAGNC-----
 A C G T G A T C G C A T C G A T A C G T A G C T C G T A C T A G C G T A A C G T G C A T C T G A A C T G G T A C A G C T A G T C G C T A
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T A C G T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTAGATTAGCTCA
ANCGTTTANN--------
 A C G T A C G T G A T C G C A T C G A T A C G T A G C T C G T A C T A G C G T A A C G T G C A T C T G A A C T G G T A C A G C T A G T C G C T A
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CTTTTAGATTAGCTCA
-----AGATAAGA---
 G A T C G C A T C G A T A C G T A G C T C G T A C T A G C G T A A C G T G C A T C T G A A C T G G T A C A G C T A G T C G C T A
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T